8R0F image
Entry Detail
PDB ID:
8R0F
EMDB ID:
Keywords:
Title:
Capsid structure of Giardiavirus (GLV) HP strain
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-10-31
Release Date:
2024-04-03
Method Details:
Experimental Method:
Resolution:
2.14 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Capsid protein
Chain IDs:A (auth: B), B (auth: A)
Chain Length:929
Number of Molecules:2
Biological Source:Giardia lamblia virus
Ligand Molecules
Primary Citation
High-resolution comparative atomic structures of two Giardiavirus prototypes infecting G. duodenalis parasite.
Plos Pathog. 20 e1012140 e1012140 (2024)
PMID: 38598600 DOI: 10.1371/journal.ppat.1012140

Abstact

The Giardia lamblia virus (GLV) is a non-enveloped icosahedral dsRNA and endosymbiont virus that infects the zoonotic protozoan parasite Giardia duodenalis (syn. G. lamblia, G. intestinalis), which is a pathogen of mammals, including humans. Elucidating the transmission mechanism of GLV is crucial for gaining an in-depth understanding of the virulence of the virus in G. duodenalis. GLV belongs to the family Totiviridae, which infects yeast and protozoa intracellularly; however, it also transmits extracellularly, similar to the phylogenetically, distantly related toti-like viruses that infect multicellular hosts. The GLV capsid structure is extensively involved in the longstanding discussion concerning extracellular transmission in Totiviridae and toti-like viruses. Hence, this study constructed the first high-resolution comparative atomic models of two GLV strains, namely GLV-HP and GLV-CAT, which showed different intracellular localization and virulence phenotypes, using cryogenic electron microscopy single-particle analysis. The atomic models of the GLV capsids presented swapped C-terminal extensions, extra surface loops, and a lack of cap-snatching pockets, similar to those of toti-like viruses. However, their open pores and absence of the extra crown protein resemble those of other yeast and protozoan Totiviridae viruses, demonstrating the essential structures for extracellular cell-to-cell transmission. The structural comparison between GLV-HP and GLV-CAT indicates the first evidence of critical structural motifs for the transmission and virulence of GLV in G. duodenalis.

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Primary Citation of related structures