8QY4 image
Entry Detail
PDB ID:
8QY4
EMDB ID:
Keywords:
Title:
Structure of interleukin 11 (gp130 P496L mutant).
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-10-25
Release Date:
2024-02-21
Method Details:
Experimental Method:
Resolution:
3.06 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Interleukin-11
Chain IDs:A, C (auth: D)
Chain Length:199
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-11 receptor subunit alpha
Chain IDs:E (auth: B), F (auth: E)
Chain Length:422
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Interleukin-6 receptor subunit beta
Chain IDs:B (auth: C), D (auth: F)
Chain Length:917
Number of Molecules:2
Biological Source:Mus musculus
Ligand Molecules
Primary Citation

Abstact

IL-11 and IL-6 activate signalling via assembly of the cell surface receptor gp130; however, it is unclear how signals are transmitted across the membrane to instruct cellular responses. Here we solve the cryoEM structure of the IL-11 receptor recognition complex to discover how differences in gp130-binding interfaces may drive signalling outcomes. We explore how mutations in the IL6ST gene encoding for gp130, which cause severe immune deficiencies in humans, impair signalling without blocking cytokine binding. We use cryoEM to solve structures of both IL-11 and IL-6 complexes with a mutant form of gp130 associated with human disease. Together with molecular dynamics simulations, we show that the disease-associated variant led to an increase in flexibility including motion within the cytokine-binding core and increased distance between extracellular domains. However, these distances are minimized as the transmembrane helix exits the membrane, suggesting a stringency in geometry for signalling and dimmer switch mode of action.

Legend

Protein

Chemical

Disease

Primary Citation of related structures