8QXP image
Deposition Date 2023-10-24
Release Date 2024-01-24
Last Version Date 2024-01-24
Entry Detail
PDB ID:
8QXP
Title:
Crystal structure of the outer membrane porin OmpW from Klebsiella pneumoniae
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.31
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
C 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:OmpW protein
Chain IDs:A
Chain Length:190
Number of Molecules:1
Biological Source:Klebsiella pneumoniae
Ligand Molecules
Primary Citation
Structure of the outer membrane porin OmpW from the pervasive pathogen Klebsiella pneumoniae.
Acta Crystallogr.,Sect.F 80 22 27 (2024)
PMID: 38206593 DOI: 10.1107/S2053230X23010579

Abstact

Conjugation is the process by which plasmids, including those that carry antibiotic-resistance genes, are mobilized from one bacterium (the donor) to another (the recipient). The conjugation efficiency of IncF-like plasmids relies on the formation of mating-pair stabilization via intimate interactions between outer membrane proteins on the donor (a plasmid-encoded TraN isoform) and recipient bacteria. Conjugation of the R100-1 plasmid into Escherichia coli and Klebsiella pneumoniae (KP) recipients relies on pairing between the plasmid-encoded TraNα in the donor and OmpW in the recipient. Here, the crystal structure of K. pneumoniae OmpW (OmpWKP) is reported at 3.2 Å resolution. OmpWKP forms an eight-stranded β-barrel flanked by extracellular loops. The structures of E. coli OmpW (OmpWEC) and OmpWKP show high conservation despite sequence variability in the extracellular loops.

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Protein

Chemical

Disease

Primary Citation of related structures
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