8QXA image
Deposition Date 2023-10-24
Release Date 2024-01-24
Last Version Date 2024-01-24
Entry Detail
PDB ID:
8QXA
Keywords:
Title:
TDP-43 amyloid fibrils: Morphology-1b
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.05 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TAR DNA-binding protein 43
Gene (Uniprot):TARDBP
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:414
Number of Molecules:12
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun 15 486 486 (2024)
PMID: 38212334 DOI: 10.1038/s41467-023-44489-0

Abstact

The transactive response DNA-binding protein-43 (TDP-43) is a multi-facet protein involved in phase separation, RNA-binding, and alternative splicing. In the context of neurodegenerative diseases, abnormal aggregation of TDP-43 has been linked to amyotrophic lateral sclerosis and frontotemporal lobar degeneration through the aggregation of its C-terminal domain. Here, we report a cryo-electron microscopy (cryo-EM)-based structural characterization of TDP-43 fibrils obtained from the full-length protein. We find that the fibrils are polymorphic and contain three different amyloid structures. The structures differ in the number and relative orientation of the protofilaments, although they share a similar fold containing an amyloid key motif. The observed fibril structures differ from previously described conformations of TDP-43 fibrils and help to better understand the structural landscape of the amyloid fibril structures derived from this protein.

Legend

Protein

Chemical

Disease

Primary Citation of related structures