8QTZ image
Deposition Date 2023-10-13
Release Date 2024-09-25
Last Version Date 2025-10-08
Entry Detail
PDB ID:
8QTZ
Keywords:
Title:
Cryo-EM reconstruction of VP5*/VP8* assembly from SA11 Rotavirus Tripsinized Triple Layered Particle
Biological Source:
Source Organism:
Rotavirus (Taxon ID: 10912)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.27 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Outer capsid protein VP4
Gene (Uniprot):VP4
Chain IDs:A (auth: X), B (auth: Y), C (auth: Z)
Chain Length:776
Number of Molecules:3
Biological Source:Rotavirus
Ligand Molecules
Primary Citation
Structural determinants of rotavirus proteolytic activation.
Plos Pathog. 21 e1013063 e1013063 (2025)
PMID: 40794814 DOI: 10.1371/journal.ppat.1013063

Abstact

The infectivity of rotavirus (RV), the leading cause of childhood diarrhea, hinges on the activation of viral particles through the proteolysis of the spike protein by trypsin-like proteases in the host intestinal lumen. In order to determine the structural basis of trypsin activation, we have used cryogenic electron microscopy (cryo-EM) and advanced image processing methods to compare uncleaved and cleaved RV particles. We find that the conformation of the non-proteolyzed spike is constrained by the position of loops that surround its structure, linking the lectin domains of the spike head to its body. The proteolysis of these loops removes this structural constraint, thereby enabling the spike to undergo the necessary conformational changes required for cell membrane penetration. Thus, these loops function as regulatory elements to ensure that the spike protein is activated precisely when and where it is needed to facilitate a successful infection.

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Disease

Primary Citation of related structures