8QSR image
Deposition Date 2023-10-11
Release Date 2024-09-25
Last Version Date 2025-01-22
Entry Detail
PDB ID:
8QSR
Title:
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-facing conformation
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.56 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PTS system glucose-specific EIICB component
Gene (Uniprot):ptsG
Chain IDs:A, B
Chain Length:499
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Structure and mechanism of a phosphotransferase system glucose transporter.
Nat Commun 15 7992 7992 (2024)
PMID: 39266522 DOI: 10.1038/s41467-024-52100-3

Abstact

Glucose is the primary source of energy for many organisms and is efficiently taken up by bacteria through a dedicated transport system that exhibits high specificity. In Escherichia coli, the glucose-specific transporter IICBGlc serves as the major glucose transporter and functions as a component of the phosphoenolpyruvate-dependent phosphotransferase system. Here, we report cryo-electron microscopy (cryo-EM) structures of the glucose-bound IICBGlc protein. The dimeric transporter embedded in lipid nanodiscs was captured in the occluded, inward- and occluded, outward-facing conformations. Together with biochemical and biophysical analyses, and molecular dynamics (MD) simulations, we provide insights into the molecular basis and dynamics for substrate recognition and binding, including the gates regulating the binding sites and their accessibility. By combination of these findings, we present a mechanism for glucose transport across the plasma membrane. Overall, this work provides molecular insights into the structure, dynamics, and mechanism of the IICBGlc transporter in a native-like lipid environment.

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Primary Citation of related structures