8QRY image
Deposition Date 2023-10-09
Release Date 2024-04-03
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8QRY
Keywords:
Title:
Crystal structure of the yeast spindle body component Spc98
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.30
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spindle pole body component
Chain IDs:A
Chain Length:96
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Primary Citation
Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol. 31 1134 1144 (2024)
PMID: 38609662 DOI: 10.1038/s41594-024-01281-y

Abstact

Microtubule (MT) filaments, composed of α/β-tubulin dimers, are fundamental to cellular architecture, function and organismal development. They are nucleated from MT organizing centers by the evolutionarily conserved γ-tubulin ring complex (γTuRC). However, the molecular mechanism of nucleation remains elusive. Here we used cryo-electron tomography to determine the structure of the native γTuRC capping the minus end of a MT in the context of enriched budding yeast spindles. In our structure, γTuRC presents a ring of γ-tubulin subunits to seed nucleation of exclusively 13-protofilament MTs, adopting an active closed conformation to function as a perfect geometric template for MT nucleation. Our cryo-electron tomography reconstruction revealed that a coiled-coil protein staples the first row of α/β-tubulin of the MT to alternating positions along the γ-tubulin ring of γTuRC. This positioning of α/β-tubulin onto γTuRC suggests a role for the coiled-coil protein in augmenting γTuRC-mediated MT nucleation. Based on our results, we describe a molecular model for budding yeast γTuRC activation and MT nucleation.

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