8QRT image
Entry Detail
PDB ID:
8QRT
Keywords:
Title:
Acyl-ACP thioesterase from Lemna paucicostata in complex with a spirolactam
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-10-09
Release Date:
2024-02-21
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Acyl-acp thioesterase
Chain IDs:A (auth: AAA), B (auth: BBB), C (auth: CCC), D (auth: DDD)
Chain Length:320
Number of Molecules:4
Biological Source:Lemna aequinoctialis
Ligand Molecules
Primary Citation
Discovery and optimization of spirocyclic lactams that inhibit acyl-ACP thioesterase.
Pest Manag Sci 81 2598 2616 (2025)
PMID: 38334233 DOI: 10.1002/ps.8015

Abstact

BACKGROUND There are various methods to control weeds, that represent considerable challenges for farmers around the globe, although applying small molecular compounds is still the most effective and versatile technology to date. In the search for novel chemical entities with new modes-of-action that can control weeds displaying resistance, we have investigated two spirocyclic classes of acyl-ACP thioesterase inhibitors based on X-ray co-crystal structures and subsequent modelling studies. RESULTS By exploiting scaffold-hopping and isostere concepts, we were able to identify new spirolactam-based lead structures showing promising activity in vivo against commercially important grass weeds in line with strong target affinity. CONCLUSION The present work covers a series of novel herbicidal lead structures that contain a spirocyclic lactam as a structural key feature carrying ortho-substituted benzyl or heteroarylmethylene side chains. These new compounds show good acyl-ACP thioesterase inhibition in line with strong herbicidal activity. Glasshouse trials showed that the spirolactams outlined herein display promising control of grass-weed species in pre-emergence application combined with dose-response windows that enable partial selectivity in wheat and corn. Remarkably, some of the novel acyl-ACP thioesterase-inhibitors showed efficacy against resistant grass weeds such as Alopecurus myosuroides and Lolium spp. on competitive levels compared with commercial standards. © 2024 Society of Chemical Industry.

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Primary Citation of related structures