8QQH image
Entry Detail
PDB ID:
8QQH
Keywords:
Title:
Structure of beta-galactosidase from Desulfurococcus amyloliticus
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-10-04
Release Date:
2024-08-14
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.21
R-Value Work:
0.16
Space Group:
P 2 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-galactosidase
Chain IDs:A (auth: AAA), B (auth: BBB)
Chain Length:988
Number of Molecules:2
Biological Source:Desulfurococcus amylolyticus
Primary Citation
The archaeal highly thermostable GH35 family beta-galactosidase Da beta Gal has a unique seven domain protein fold.
Febs J. 291 3686 3705 (2024)
PMID: 38825733 DOI: 10.1111/febs.17166

Abstact

The most extensively studied β-d-galactosidases (EC3.2.1.23) belonging to four glycoside hydrolase (GH) families 1, 2, 35, and 42 are widely distributed among Bacteria, Archaea and Eukaryotes. Here, we report a novel GH35 family β-galactosidase from the hyperthermophilic Thermoprotei archaeon Desulfurococcus amylolyticus (DaβGal). Unlike fungal monomeric six-domain β-galactosidases, the DaβGal enzyme is a dimer; it has an extra jelly roll domain D7 and three composite domains (D4, D5, and D6) that are formed by the distantly located polypeptide chain regions. The enzyme possesses a high specificity for β-d-galactopyranosides, and its distinguishing feature is the ability to cleave pNP-β-d-fucopyranoside. DaβGal efficiently catalyzes the hydrolysis of lactose at high temperatures, remains stable and active at 65 °С, and retains activity at 95 °С with a half-life time value equal to 73 min. These properties make archaeal DaβGal a more attractive candidate for biotechnology than the widely used fungal β-galactosidases.

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