8QMP image
Entry Detail
PDB ID:
8QMP
EMDB ID:
Title:
Structure of the E2 Beryllium Fluoride Complex of the Autoinhibited Calcium ATPase ACA8
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-09-25
Release Date:
2024-10-02
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Calcium-transporting ATPase 8, plasma membrane-type
Chain IDs:A
Chain Length:1054
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
Conserved N-terminal Regulation of the ACA8 Calcium Pump with Two Calmodulin Binding Sites.
J.Mol.Biol. 436 168747 168747 (2024)
PMID: 39168442 DOI: 10.1016/j.jmb.2024.168747

Abstact

The autoinhibited plasma membrane calcium ATPase ACA8 from A. thaliana has an N-terminal autoinhibitory domain. Binding of calcium-loaded calmodulin at two sites located at residues 42-62 and 74-96 relieves autoinhibition of ACA8 activity. Through activity studies and a yeast complementation assay we investigated wild-type (WT) and N-terminally truncated ACA8 constructs (Δ20, Δ30, Δ35, Δ37, Δ40, Δ74 and Δ100) to explore the role of conserved motifs in the N-terminal segment preceding the calmodulin binding sites. Furthermore, we purified WT, Δ20- and Δ100-ACA8, tested activity in vitro and performed structural studies of purified Δ20-ACA8 stabilized in a lipid nanodisc to explore the mechanism of autoinhibition. We show that an N-terminal segment between residues 20 and 35 including conserved Phe32, upstream of the calmodulin binding sites, is important for autoinhibition and the activation by calmodulin. Cryo-EM structure determination at 3.3 Å resolution of a beryllium fluoride inhibited E2 form, and at low resolution for an E1 state combined with AlphaFold prediction provide a model for autoinhibition, consistent with the mutational studies.

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