8QLQ image
Entry Detail
PDB ID:
8QLQ
Keywords:
Title:
Human MST3 (STK24) kinase in complex with macrocyclic inhibitor JA310
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-09-20
Release Date:
2023-11-08
Method Details:
Experimental Method:
Resolution:
1.64 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Serine/threonine-protein kinase 24
Chain IDs:A
Chain Length:306
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Synthesis of Pyrazole-Based Macrocycles Leads to a Highly Selective Inhibitor for MST3.
J.Med.Chem. 67 674 690 (2024)
PMID: 38126712 DOI: 10.1021/acs.jmedchem.3c01980

Abstact

MST1, MST2, MST3, MST4, and YSK1 are conserved members of the mammalian sterile 20-like serine/threonine (MST) family that regulate cellular functions such as proliferation and migration. The MST3 isozyme plays a role in regulating cell growth and apoptosis, and its dysregulation has been linked to high-grade tumors. To date, there are no isoform-selective inhibitors that could be used for validating the role of MST3 in tumorigenesis. We designed a series of 3-aminopyrazole-based macrocycles based on the structure of a promiscuous inhibitor. By varying the moieties targeting the solvent-exposed region and optimizing the linker, macrocycle JA310 (21c) was synthesized. JA310 exhibited high cellular potency for MST3 (EC50 = 106 nM) and excellent kinome-wide selectivity. The crystal structure of the MST3-JA310 complex provided intriguing insights into the binding mode, which is associated with large-scale structural rearrangements. In summary, JA310 demonstrates the utility of macrocyclization for the design of highly selective inhibitors and presents the first chemical probe for MST3.

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