8QKM image
Deposition Date 2023-09-15
Release Date 2025-03-26
Last Version Date 2025-03-26
Entry Detail
PDB ID:
8QKM
Keywords:
VIRUS LIKE PARTICLE
Title:
Symmetric structure of Satellite Tobacco Necrosis Virus-Like Particle with PS1-5 gRNA
Biological Source:
Source Organism:
Satellite tobacco necrosis virus 1 (Taxon ID: 12445)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.39 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8QKM validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: a), BA (auth: b), CA (auth: c), DA (auth: d), EA (auth: e), FA (auth: f), GA (auth: g), HA (auth: h), IA (auth: i), JA (auth: j), KA (auth: k), LA (auth: l), MA (auth: m), NA (auth: n), OA (auth: o), PA (auth: p), QA (auth: q), RA (auth: r), SA (auth: s), TA (auth: t), UA (auth: u), VA (auth: v), WA (auth: w), XA (auth: x), YA (auth: y), ZA (auth: z), AB (auth: 0), BB (auth: 1), CB (auth: 2), DB (auth: 3), EB (auth: 4), FB (auth: 5), GB (auth: 6), HB (auth: 7)
Chain Length:188
Number of Molecules:60
Biological Source:Satellite tobacco necrosis virus 1
UniProt ID:P03606 Pfam ID:PF03898
Ligand Molecules
CA
Primary Citation
Virion assembly is regulated by sequence-specific and flexible genomic RNA-coat protein contacts
To Be Published ? ? ? (?)
Primary Citation of related structures
8QKM