8QIE image
Entry Detail
PDB ID:
8QIE
EMDB ID:
Keywords:
Title:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4
Biological Source:
PDB Version:
Deposition Date:
2023-09-12
Release Date:
2025-01-01
Method Details:
Experimental Method:
Resolution:
2.43 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polyribonucleotide
Description:LSUa_rRNA_chain_1
Chain IDs:A (auth: 1)
Chain Length:1782
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:LSUb_rRNA_chain_2
Chain IDs:B (auth: 2)
Chain Length:1526
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:SR1_chain_3
Chain IDs:C (auth: 3)
Chain Length:216
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:SR2_chain_4
Chain IDs:D (auth: 4)
Chain Length:184
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:SR4_chain_5
Chain IDs:E (auth: 5)
Chain Length:135
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:SR6_chain_6
Chain IDs:F (auth: 6)
Chain Length:73
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:5.8S_rRNA_chain_7
Chain IDs:G (auth: 7)
Chain Length:171
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:5S_rRNA_chain_8
Chain IDs:H (auth: 8)
Chain Length:123
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L2
Chain IDs:I (auth: A)
Chain Length:260
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein L3
Chain IDs:J (auth: B)
Chain Length:70
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein L1a
Chain IDs:K (auth: C)
Chain Length:373
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L11
Chain IDs:L (auth: D)
Chain Length:188
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L9
Chain IDs:M (auth: E)
Chain Length:190
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L6
Chain IDs:N (auth: F)
Chain Length:195
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L7a
Chain IDs:O (auth: G)
Chain Length:144
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L13a
Chain IDs:P (auth: H)
Chain Length:168
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L13
Chain IDs:Q (auth: I)
Chain Length:220
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L23
Chain IDs:R (auth: J)
Chain Length:83
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein L14
Chain IDs:S (auth: K)
Chain Length:83
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L27A/L29
Chain IDs:T (auth: L)
Chain Length:51
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Ribosomal protein L15
Chain IDs:U (auth: M)
Chain Length:204
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L10
Chain IDs:V (auth: N)
Chain Length:34
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L5
Chain IDs:W (auth: O)
Chain Length:92
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L18
Chain IDs:X (auth: P)
Chain Length:106
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L19
Chain IDs:Y (auth: Q)
Chain Length:254
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L18a
Chain IDs:Z (auth: R)
Chain Length:179
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L21
Chain IDs:AA (auth: S)
Chain Length:159
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:SSU_rRNA_chain_S1
Chain IDs:BA (auth: S1)
Chain Length:2204
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polyribonucleotide
Description:E-site_tRNA_chain_S4
Chain IDs:CA (auth: S4)
Chain Length:76
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S3a
Chain IDs:DA (auth: SA)
Chain Length:264
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein SA
Chain IDs:EA (auth: SB)
Chain Length:112
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S3
Chain IDs:FA (auth: SC)
Chain Length:219
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S9
Chain IDs:GA (auth: SD)
Chain Length:87
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S4
Chain IDs:HA (auth: SE)
Chain Length:273
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S2
Chain IDs:IA (auth: SF)
Chain Length:152
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S6
Chain IDs:JA (auth: SG)
Chain Length:249
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S5
Chain IDs:KA (auth: SH)
Chain Length:190
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S7
Chain IDs:LA (auth: SI)
Chain Length:200
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S15A
Chain IDs:MA (auth: SJ)
Chain Length:130
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S8
Chain IDs:NA (auth: SK)
Chain Length:220
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S16
Chain IDs:OA (auth: SL)
Chain Length:149
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein S20
Chain IDs:PA (auth: SM)
Chain Length:116
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S10
Chain IDs:QA (auth: SN)
Chain Length:168
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S14
Chain IDs:RA (auth: SO)
Chain Length:144
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S23
Chain IDs:SA (auth: SP)
Chain Length:143
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S12
Chain IDs:TA (auth: SQ)
Chain Length:141
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S18
Chain IDs:UA (auth: SR)
Chain Length:153
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein S29
Chain IDs:VA (auth: SS)
Chain Length:57
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S13
Chain IDs:WA (auth: ST)
Chain Length:151
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S11
Chain IDs:XA (auth: SU)
Chain Length:173
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S17
Chain IDs:YA (auth: SV)
Chain Length:143
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S15
Chain IDs:ZA (auth: SW)
Chain Length:152
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S19-like protein
Chain IDs:AB (auth: SX)
Chain Length:161
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S21
Chain IDs:BB (auth: SY)
Chain Length:164
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S24
Chain IDs:CB (auth: SZ)
Chain Length:137
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S25
Chain IDs:DB (auth: Sa)
Chain Length:264
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S26
Chain IDs:EB (auth: Sb)
Chain Length:112
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S27-1
Chain IDs:FB (auth: Sc)
Chain Length:219
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 40S ribosomal protein S33
Chain IDs:GB (auth: Sd)
Chain Length:87
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:40S ribosomal protein S30
Chain IDs:HB (auth: Se)
Chain Length:273
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Ubiquitin-60S ribosomal protein L40
Chain IDs:IB (auth: Sf)
Chain Length:152
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein subunit beta-like protein
Chain IDs:JB (auth: Sg)
Chain Length:249
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative RNA binding protein
Chain IDs:KB (auth: Sh)
Chain Length:190
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L17
Chain IDs:LB (auth: T)
Chain Length:166
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L22
Chain IDs:MB (auth: U)
Chain Length:129
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L23a
Chain IDs:NB (auth: V)
Chain Length:145
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L26
Chain IDs:OB (auth: W)
Chain Length:143
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein L24
Chain IDs:PB (auth: X)
Chain Length:124
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L27
Chain IDs:QB (auth: Y)
Chain Length:134
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L28
Chain IDs:RB (auth: Z)
Chain Length:147
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L35
Chain IDs:SB (auth: a)
Chain Length:260
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L29
Chain IDs:TB (auth: b)
Chain Length:70
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L7
Chain IDs:UB (auth: c)
Chain Length:373
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L30
Chain IDs:VB (auth: d)
Chain Length:188
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal subunit protein L31
Chain IDs:WB (auth: e)
Chain Length:190
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L32
Chain IDs:XB (auth: f)
Chain Length:195
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein l35a
Chain IDs:YB (auth: g)
Chain Length:144
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L34
Chain IDs:ZB (auth: h)
Chain Length:168
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S Ribosomal protein L36
Chain IDs:AC (auth: i)
Chain Length:220
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Ribosomal protein L37
Chain IDs:BC (auth: j)
Chain Length:83
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative ribosomal protein L38
Chain IDs:CC (auth: k)
Chain Length:83
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L39
Chain IDs:DC (auth: l)
Chain Length:51
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Ubiquitin-60S ribosomal protein L40
Chain IDs:EC (auth: m)
Chain Length:204
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L41
Chain IDs:FC (auth: n)
Chain Length:34
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:60S ribosomal protein L37a
Chain IDs:GC (auth: o)
Chain Length:92
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Polymer Type:polypeptide(L)
Description:Putative 60S ribosomal protein L44
Chain IDs:HC (auth: p)
Chain Length:106
Number of Molecules:1
Biological Source:Leishmania major strain Friedlin
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
A2M G A modified residue
OMG G G modified residue
OMU C U modified residue
PSU G U modified residue
Primary Citation
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 mutant snoRNA overexpression, class 4
To Be Published ? ? ? (?)
Primary Citation of related structures