8QHH image
Deposition Date 2023-09-08
Release Date 2023-11-08
Last Version Date 2023-11-08
Entry Detail
PDB ID:
8QHH
Keywords:
Title:
NMR solution structure of the green kiwi fruit allergen Act d 8.0101
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bet v 1 related allergen
Gene (Uniprot):ypr-10
Chain IDs:A
Chain Length:156
Number of Molecules:1
Biological Source:Actinidia deliciosa
Ligand Molecules
Primary Citation
NMR resonance assignments of the PR-10 allergens Act c 8 and Act d 8 from golden and green kiwifruit.
Biomol NMR Assign 15 367 371 (2021)
PMID: 34106433 DOI: 10.1002/prot.20449

Abstact

Kiwifruits have become one of the most common food sources triggering allergic reactions. In patients suffering from birch pollen related food allergy, reactions result from initial sensitization to the birch (Betula verrucosa) pollen allergen Bet v 1, followed by immunological cross-reactivity to structurally homologous proteins in kiwifruit. Clinical symptoms range from scratching and itching of the oral cavity to more severe immunological reactions such as rhino conjunctivitis. In this work we assigned backbone and side chain 1H, 13C and 15N chemical shifts of the 17 kDa PR-10 allergens Act c 8.0101 and Act d 8.0101 from golden (Actinidia chinesis) and green (Actinidia deliciosa) kiwifruit by solution NMR spectroscopy. The chemical shift data confirm the characteristic Bet v 1 fold for both proteins, consisting of a seven-stranded antiparallel β-sheet interrupted by two short α-helices, along with a long C-terminal α-helix. Our data provide the basis for determining the three-dimensional solution structures of these proteins and characterizing their immunological cross-reactivity on a structural basis.

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Primary Citation of related structures