8QHE image
Entry Detail
PDB ID:
8QHE
Title:
Crystal structure IR-09
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-09-07
Release Date:
2023-10-11
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:6-phosphogluconate dehydrogenase NADP-binding domain-containing protein
Chain IDs:A
Chain Length:305
Number of Molecules:1
Biological Source:Aspergillus lentulus
Primary Citation
Biocatalysis in Drug Design: Engineered Reductive Aminases (RedAms) Are Used to Access Chiral Building Blocks with Multiple Stereocenters.
J.Am.Chem.Soc. 145 22041 22046 (2023)
PMID: 37782882 DOI: 10.1021/jacs.3c07010

Abstact

Novel building blocks are in constant demand during the search for innovative bioactive small molecule therapeutics by enabling the construction of structure-activity-property-toxicology relationships. Complex chiral molecules containing multiple stereocenters are an important component in compound library expansion but can be difficult to access by traditional organic synthesis. Herein, we report a biocatalytic process to access a specific diastereomer of a chiral amine building block used in drug discovery. A reductive aminase (RedAm) was engineered following a structure-guided mutagenesis strategy to produce the desired isomer. The engineered RedAm (IR-09 W204R) was able to generate the (S,S,S)-isomer 3 in 45% conversion and 95% ee from the racemic ketone 2. Subsequent palladium-catalyzed deallylation of 3 yielded the target primary amine 4 in a 73% yield. This engineered biocatalyst was used at preparative scale and represents a potential starting point for further engineering and process development.

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