8QEO image
Deposition Date 2023-09-01
Release Date 2024-03-20
Last Version Date 2024-11-06
Entry Detail
PDB ID:
8QEO
Keywords:
Title:
cryo-EM structure complex of Frizzled-7 and Clostridioides difficile toxin B
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.26 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Toxin B
Gene (Uniprot):tcdB
Chain IDs:A
Chain Length:2397
Number of Molecules:1
Biological Source:Clostridioides difficile
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Frizzled-7
Gene (Uniprot):FZD7
Chain IDs:B
Chain Length:603
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural and functional insight into the interaction of Clostridioides difficile toxin B and FZD 7.
Cell Rep 43 113727 113727 (2024)
PMID: 38308843 DOI: 10.1016/j.celrep.2024.113727

Abstact

The G protein-coupled receptors of the Frizzled (FZD) family, in particular FZD1,2,7, are receptors that are exploited by Clostridioides difficile toxin B (TcdB), the major virulence factor responsible for pathogenesis associated with Clostridioides difficile infection. We employ a live-cell assay examining the affinity between full-length FZDs and TcdB. Moreover, we present cryoelectron microscopy structures of TcdB alone and in complex with full-length FZD7, which reveal that large structural rearrangements of the combined repetitive polypeptide domain are required for interaction with FZDs and other TcdB receptors, constituting a first step for receptor recognition. Furthermore, we show that bezlotoxumab, an FDA-approved monoclonal antibody to treat Clostridioides difficile infection, favors the apo-TcdB structure and thus disrupts binding with FZD7. The dynamic transition between the two conformations of TcdB also governs the stability of the pore-forming region. Thus, our work provides structural and functional insight into how conformational dynamics of TcdB determine receptor binding.

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Primary Citation of related structures
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