ISDA: 8QEM

Deposition Date 2023-08-31

Release Date 2024-09-11

Last Version Date 2024-09-11

Entry Detail

PDB ID:

8QEM

Keywords:

VIRUS

Title:

Neck channel of phage 812 after tail contraction (C1)

Biological Source:

Source Organism:

Staphylococcus phage 812 (Taxon ID: 307898)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.96 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative neck protein
Gene (Uniprot):812_096, 812_098, 812a_098, 812F1_098, K1/420_098, K1_098
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:302
Number of Molecules:12
Biological Source:Staphylococcus phage 812

UniProt ID:A1YTN6

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Portal protein
Gene (Uniprot):812_091, 812_093, 812a_093, 812F1_093, K1/420_093, K1_093
Chain IDs:M, N, O, P, Q, R, S, T, U, V, W, X
Chain Length:563
Number of Molecules:12
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WIV9 Pfam ID:PF04860

Polymer Type:polydeoxyribonucleotide
Molecule:Channel DNA forward strand (63-MER)
Chain IDs:Z (auth: Y)
Chain Length:63
Number of Molecules:1
Biological Source:Staphylococcus phage 812

Polymer Type:polydeoxyribonucleotide
Molecule:Channel DNA reverse strand (63-MER)
Chain IDs:Y (auth: Z)
Chain Length:63
Number of Molecules:1
Biological Source:Staphylococcus phage 812

Ligand Molecules

Primary Citation

Genome anchoring, retention, and release by neck proteins of Herelleviridae phage 812

Cienikova, Z, Novacek, J, Siborova, M, Popelarova, B, Fuzik, T, Benesik, M, Bardy, P, Plevka, P.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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