ISDA: 8QEK

Deposition Date 2023-08-31

Release Date 2024-09-11

Last Version Date 2025-02-19

Entry Detail

PDB ID:

8QEK

Keywords:

VIRUS

Title:

Neck and tail of phage 812 after tail contraction (composite)

Biological Source:

Source Organism:

Staphylococcus phage 812 (Taxon ID: 307898)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.60 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Capsid protein
Gene (Uniprot):812a_104, 812F1_104, K1/420_104, K1_104
Chain IDs:E (auth: A), G
Chain Length:142
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:A1YTP2

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Major tail sheath protein
Gene (Uniprot):812a_103, 812F1_103, K1/420_103, K1_103
Chain IDs:K (auth: B), L (auth: I), M (auth: O)
Chain Length:587
Number of Molecules:3
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WZ79

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate hub assembly protein
Gene (Uniprot):812_099, 812_101, 812a_101, 812F1_101, K1/420_101, K1_101
Chain IDs:F (auth: M)
Chain Length:278
Number of Molecules:1
Biological Source:Staphylococcus phage 812

UniProt ID:A1YTN9

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Capsid protein
Gene (Uniprot):812_097, 812_099, 812a_099, 812F1_099, K1/420_099, K1_099
Chain IDs:H (auth: S)
Chain Length:292
Number of Molecules:1
Biological Source:Staphylococcus phage 812

UniProt ID:A1YTN7

Polymer Type:polydeoxyribonucleotide
Molecule:Anchor DNA forward strand (120-MER)
Chain IDs:C (auth: Y)
Chain Length:120
Number of Molecules:1
Biological Source:Staphylococcus phage 812

Polymer Type:polydeoxyribonucleotide
Molecule:Anchor DNA reverse strand (120-MER)
Chain IDs:D (auth: Z)
Chain Length:120
Number of Molecules:1
Biological Source:Staphylococcus phage 812

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative neck protein
Gene (Uniprot):812_096, 812_098, 812a_098, 812F1_098, K1/420_098, K1_098
Chain IDs:I (auth: b), J (auth: c)
Chain Length:587
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:A1YTN6

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Portal protein
Gene (Uniprot):812_091, 812_093, 812a_093, 812F1_093, K1/420_093, K1_093
Chain IDs:A (auth: p), B (auth: D)
Chain Length:563
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WIV9 Pfam ID:PF04860

Ligand Molecules

Primary Citation

Genome anchoring, retention, and release by neck proteins of Herelleviridae phage 812

Cienikova, Z, Novacek, J, Siborova, M, Popelarova, B, Fuzik, T, Benesik, M, Bardy, P, Plevka, P.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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