8Q90 image
Entry Detail
PDB ID:
8Q90
Keywords:
Title:
Halophilic Lrp transcription factor
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-08-19
Release Date:
2024-01-31
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:AsnC family transcriptional regulator
Chain IDs:A, B
Chain Length:159
Number of Molecules:2
Biological Source:Haloferax mediterranei
Primary Citation
Global Lrp regulator protein from Haloferax mediterranei: Transcriptional analysis and structural characterization.
Int.J.Biol.Macromol. 260 129541 129541 (2024)
PMID: 38244746 DOI: 10.1016/j.ijbiomac.2024.129541

Abstact

Haloferax mediterranei, an extreme halophilic archaeon thriving in hypersaline environments, has acquired significant attention in biotechnological and biochemical research due to its remarkable ability to flourish in extreme salinity conditions. Transcription factors, essential in regulating diverse cellular processes, have become focal points in understanding its adaptability. This study delves into the role of the Lrp transcription factor, exploring its modulation of glnA, nasABC, and lrp gene promoters in vivo through β-galactosidase assays. Remarkably, our findings propose Lrp as the pioneering transcriptional regulator of nitrogen metabolism identified in a haloarchaeon. This study suggests its potential role in activating or repressing assimilatory pathway enzymes (GlnA and NasA). The interaction between Lrp and these promoters is analyzed using Electrophoretic Mobility Shift Assay and Differential Scanning Fluorimetry, highlighting l-glutamine's indispensable role in stabilizing the Lrp-DNA complex. Our research uncovers that halophilic Lrp forms octameric structures in the presence of l-glutamine. The study reveals the three-dimensional structure of the Lrp as a homodimer using X-ray crystallography, confirming this state in solution by Small-Angle X-ray Scattering. These findings illuminate the complex molecular mechanisms driving Hfx. mediterranei's nitrogen metabolism, offering valuable insights about its gene expression regulation and enriching our comprehension of extremophile biology.

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