8Q6D image
Deposition Date 2023-08-11
Release Date 2024-08-21
Last Version Date 2024-08-21
Entry Detail
PDB ID:
8Q6D
Keywords:
OXIDOREDUCTASE
Title:
Anaerobic crystal structure of HIF prolyl hydroxylase 2 (PHD2 181-407) in complex with HIF2alpha-CODD peptide (523-542), Fe(II) and 2-oxoglutarate (2OG)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.40 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 2 21
8Q6D validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Egl nine homolog 1
Gene (Uniprot):EGLN1
Chain IDs:A
Chain Length:233
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q9GZT9 Pfam ID:PF13640 EC:1.14.11.2
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Endothelial PAS domain-containing protein 1
Gene (Uniprot):EPAS1
Chain IDs:B
Chain Length:20
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q99814 Pfam ID:PF11413
Ligand Molecules
AKG
FE
Primary Citation
HIF prolyl hydroxylase 2 in complex with HIF2alpha-CODD
To Be Published ? ? ? (?)
Primary Citation of related structures
8Q6D