8Q66 image
Deposition Date 2023-08-11
Release Date 2024-03-06
Last Version Date 2024-09-18
Entry Detail
PDB ID:
8Q66
Title:
Crystal Structure of the C. elegans MUT-7 MUT-8 CTD complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Exonuclease mut-7
Gene (Uniprot):mut-7
Chain IDs:A
Chain Length:272
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SH2 domain-containing protein
Gene (Uniprot):rde-2
Chain IDs:B
Chain Length:251
Number of Molecules:1
Biological Source:Caenorhabditis elegans
Primary Citation
MUT-7 exoribonuclease activity and localization are mediated by an ancient domain.
Nucleic Acids Res. 52 9076 9091 (2024)
PMID: 39188014 DOI: 10.1093/nar/gkae610

Abstact

The MUT-7 family of 3'-5' exoribonucleases is evolutionarily conserved across the animal kingdom and plays essential roles in small RNA production in the germline. Most MUT-7 homologues carry a C-terminal domain of unknown function named MUT7-C appended to the exoribonuclease domain. Our analysis shows that the MUT7-C is evolutionary ancient, as a minimal version of the domain exists as an individual protein in prokaryotes. In animals, MUT7-C has acquired an insertion that diverged during evolution, expanding its functions. Caenorhabditis elegans MUT-7 contains a specific insertion within MUT7-C, which allows binding to MUT-8 and, consequently, MUT-7 recruitment to germ granules. In addition, in C. elegans and human MUT-7, the MUT7-C domain contributes to RNA binding and is thereby crucial for ribonuclease activity. This RNA-binding function most likely represents the ancestral function of the MUT7-C domain. Overall, this study sheds light on MUT7-C and assigns two functions to this previously uncharacterized domain.

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Primary Citation of related structures