ISDA

Entry Detail

PDB ID:

8PXM

Keywords:

Title:

N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(pentane-1,5-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2023-07-23

Release Date:

2023-10-04

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.38 Å

R-Value Free:

0.30

R-Value Work:

0.20

R-Value Observed:

0.21

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Bromodomain-containing protein 4
Chain IDs:A, B
Chain Length:127
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:O60885 Pfam ID:PF00439

Ligand Molecules

EDO

ZTY

Primary Citation

Design and Characterization of 1,3-Dihydro-2 H -benzo[ d ]azepin-2-ones as Rule-of-5 Compliant Bivalent BET Inhibitors.

Bamborough, P, Chung, C.W, Goodwin, N.C, Mitchell, D.J, Neipp, C.E, Phillipou, A, Preston, A, Prinjha, R.K, Soden, P.E, Watson, R.J, Demont, E.H.Show

Acs Med.Chem.Lett. 14 1231 1236 (2023)

PMID: 37736196 DOI: 10.1021/acsmedchemlett.3c00242

Abstact

The 1,3-dihydro-2H-benzo[d]azepin-2-ones are potent and ligand-efficient pan-BET bromodomain inhibitors. Here we describe the extension of this template to exploit a bivalent mode of action, binding simultaneously to both bromodomains. Initially the linker length and attachment vectors compatible with bivalent binding were explored, leading to the discovery of exceptionally potent bivalent BET inhibitors within druglike rule-of-5 space.

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Primary Citation of related structures