8PVU image
Entry Detail
PDB ID:
8PVU
EMDB ID:
Keywords:
Title:
Cryo-EM structure of DHS-ERK2 complex with 1:1 stoichiometry refined in C1 symmetry
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-07-18
Release Date:
2024-10-16
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Deoxyhypusine synthase
Chain IDs:B (auth: A), C (auth: B), D (auth: C), E (auth: D)
Chain Length:370
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Mitogen-activated protein kinase 1
Chain IDs:A (auth: E)
Chain Length:361
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
ERK1/2 interaction with DHPS regulates eIF5A deoxyhypusination independently of ERK kinase activity.
Cell Rep 43 114831 114831 (2024)
PMID: 39392755 DOI: 10.1016/j.celrep.2024.114831

Abstact

This study explores a non-kinase effect of extracellular regulated kinases 1/2 (ERK1/2) on the interaction between deoxyhypusine synthase (DHPS) and its substrate, eukaryotic translation initiation factor 5A (eIF5A). We report that Raf/MEK/ERK activation decreases the DHPS-ERK1/2 interaction while increasing DHPS-eIF5A association in cells. We determined the cryoelectron microscopy (cryo-EM) structure of the DHPS-ERK2 complex at 3.5 Å to show that ERK2 hinders substrate entrance to the DHPS active site, subsequently inhibiting deoxyhypusination in vitro. In cells, impairing the ERK2 activation loop, but not the catalytic site, prolongs the DHPS-ERK2 interaction irrespective of Raf/MEK signaling. The ERK2 Ser-Pro-Ser motif, but not the common docking or F-site recognition sites, also regulates this complex. These data suggest that ERK1/2 dynamically regulate the DHPS-eIF5A interaction in response to Raf/MEK activity, regardless of its kinase function. In contrast, ERK1/2 kinase activity is necessary to regulate the expression of DHPS and eIF5A. These findings highlight an ERK1/2-mediated dual kinase-dependent and -independent regulation of deoxyhypusination.

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Primary Citation of related structures