ISDA

Deposition Date 2023-06-27

Release Date 2024-07-10

Last Version Date 2025-07-09

Entry Detail

PDB ID:

8PKO

Keywords:

OXIDOREDUCTASE

Title:

The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).

Biological Source:

Source Organism:

Thermochaetoides thermophila (Taxon ID: 209285)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.60 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Green fluorescent protein,alpha-1,2-Mannosidase
Gene (Uniprot):CTHT_0058730, GFP
Mutations:N-term truncation and GFP fusion
Chain IDs:A
Chain Length:1284
Number of Molecules:1
Biological Source:Thermochaetoides thermophila

UniProt ID:P42212,G0SCX7 Pfam ID:PF01353, PF01532

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein disulfide-isomerase
Gene (Uniprot):CTHT_0067360
Mutations:Deletion of Cterminal HDEL
Chain IDs:B
Chain Length:507
Number of Molecules:1
Biological Source:Thermochaetoides thermophila

UniProt ID:G0SGS2 Pfam ID:PF00085, PF13848

Ligand Molecules