8PI1 image
Deposition Date 2023-06-20
Release Date 2023-11-01
Last Version Date 2024-11-06
Entry Detail
PDB ID:
8PI1
Keywords:
Title:
Bicyclic INCYPRO Pseudomonas fluorescens esterase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Arylesterase
Gene (Uniprot):estF
Mutations:T3C, Q174C
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Chain Length:280
Number of Molecules:15
Biological Source:Pseudomonas fluorescens
Primary Citation
Covalent bicyclization of protein complexes yields durable quaternary structures.
Chem 10 615 627 (2024)
PMID: 38344167 DOI: 10.1016/j.chempr.2023.10.003

Abstact

Proteins are essential biomolecules and central to biotechnological applications. In many cases, assembly into higher-order structures is a prerequisite for protein function. Under conditions relevant for applications, protein integrity is often challenged, resulting in disassembly, aggregation, and loss of function. The stabilization of quaternary structure has proven challenging, particularly for trimeric and higher-order complexes, given the complexity of involved inter- and intramolecular interaction networks. Here, we describe the chemical bicyclization of homotrimeric protein complexes, thereby increasing protein resistance toward thermal and chemical stress. This approach involves the structure-based selection of cross-linking sites, their variation to cysteine, and a subsequent reaction with a triselectrophilic agent to form a protein assembly with bicyclic topology. Besides overall increased stability, we observe resistance toward aggregation and greatly prolonged shelf life. This bicyclization strategy gives rise to unprecedented protein chain topologies and can enable new biotechnological and biomedical applications.

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