8PEL image
Entry Detail
PDB ID:
8PEL
Keywords:
RNA BINDING PROTEIN
Title:
Structure of C. thermophilum RNA exosome core
Biological Source:
Source Organism:
Thermochaetoides thermophila DSM 1495
Host Organism:
Escherichia coli
PDB Version:
Deposition Date:
2023-06-14
Release Date:
2024-06-26
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
3.81 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 21
8PEL validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Rrp45
Chain IDs:A
Chain Length:293
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0S755 Pfam ID:PF01138, PF03725
Protein Blast
Polymer Type:polypeptide(L)
Description:Exoribonuclease phosphorolytic domain-containing protein
Chain IDs:B
Chain Length:284
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0SC21 Pfam ID:PF01138, PF03725
Protein Blast
Polymer Type:polypeptide(L)
Description:Exoribonuclease-like protein
Chain IDs:C
Chain Length:357
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0S1P1 Pfam ID:PF01138
Protein Blast
Polymer Type:polypeptide(L)
Description:Exoribonuclease phosphorolytic domain-containing protein
Chain IDs:D
Chain Length:258
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0SCD1 Pfam ID:PF01138
Protein Blast
Polymer Type:polypeptide(L)
Description:Exoribonuclease phosphorolytic domain-containing protein
Chain IDs:E
Chain Length:413
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0RZG4 Pfam ID:PF01138
Protein Blast
Polymer Type:polypeptide(L)
Description:Exosome complex component MTR3
Chain IDs:F
Chain Length:284
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:P0CT46 Pfam ID:PF01138
Protein Blast
Polymer Type:polypeptide(L)
Description:Ribosomal RNA-processing protein 40
Mutations:G-1, A0
Chain IDs:G
Chain Length:256
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0RZX8 Pfam ID:PF18311, PF21262, PF15985
Protein Blast
Polymer Type:polypeptide(L)
Description:Putative exosome complex protein
Chain IDs:H
Chain Length:358
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0S9A0 Pfam ID:PF14382, PF21266
Protein Blast
Polymer Type:polypeptide(L)
Description:Putative exosome 3'->5 protein
Chain IDs:I
Chain Length:220
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
UniProt ID:G0SE33 Pfam ID:PF14382, PF10447
Ligand Molecules
NA
Primary Citation
Beyond static structures: quantitative dynamics in the eukaryotic RNA exosome complex
Biorxiv ? ? ? (2024)
DOI: 10.1101/2024.01.28.577622
Primary Citation of related structures
8R1O