8PAQ image
Entry Detail
PDB ID:
8PAQ
Keywords:
Title:
Structure of the small subunit of the laccase-like Nlac protein from Pleurotus eryngii
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2023-06-08
Release Date:
2024-02-07
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:POXA3b laccase small subunit
Chain IDs:A, B
Chain Length:166
Number of Molecules:2
Biological Source:Pleurotus eryngii
Primary Citation
Role and structure of the small subunit forming heterodimers with laccase-like enzymes.
Protein Sci. 32 e4734 e4734 (2023)
PMID: 37483125 DOI: 10.1002/pro.4734

Abstact

Unlike laccases sensu stricto, which are usually monomeric enzymes, laccase-like enzymes recently re-classified as Novel Laccases (NLACs) are characterized by the formation of heterodimers with small proteins (subunits) of unknown function. Here the NLAC from Pleurotus eryngii (PeNL) and a small protein selected from the fungal genome, that is homologous to reported POXA3 from Pleurotus ostreatus, were produced in Aspergillus oryzae separately or together. The two proteins interacted regardless of whether the small subunit was co-expressed or exogenously added to the enzyme. The stability and catalytic activity of PeNL was significantly enhanced in the presence of the small subunit. Size exclusion chromatography-multi angle light scattering (SEC-MALS) analysis confirmed that the complex PeNL-ss is a heterodimer of 77.4 kDa. The crystallographic structure of the small protein expressed in Escherichia coli was solved at 1.6 Å resolution. This is the first structure elucidated of a small subunit of a NLAC. The helix bundle structure of the small subunit accommodates well with the enzyme model structure, including interactions with specific regions of NLACs and some amino acid residues of the substrate-binding loops.

Legend

Protein

Chemical

Disease

Primary Citation of related structures