8P52 image
Entry Detail
PDB ID:
8P52
EMDB ID:
Keywords:
Title:
Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-05-23
Release Date:
2023-11-01
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Toxin protein
Chain IDs:A
Chain Length:2971
Number of Molecules:1
Biological Source:Photorhabdus luminescens
Ligand Molecules
Primary Citation
Structure and activation mechanism of the Makes caterpillars floppy 1 toxin.
Nat Commun 14 8226 8226 (2023)
PMID: 38086871 DOI: 10.1038/s41467-023-44069-2

Abstact

The bacterial Makes caterpillars floppy 1 (Mcf1) toxin promotes apoptosis in insects, leading to loss of body turgor and death. The molecular mechanism underlying Mcf1 intoxication is poorly understood. Here, we present the cryo-EM structure of Mcf1 from Photorhabdus luminescens, revealing a seahorse-like shape with a head and tail. While the three head domains contain two effectors, as well as an activator-binding domain (ABD) and an autoprotease, the tail consists of two putative translocation and three putative receptor-binding domains. Rearrangement of the tail moves the C-terminus away from the ABD and allows binding of the host cell ADP-ribosylation factor 3, inducing conformational changes that position the cleavage site closer to the protease. This distinct activation mechanism that is based on a hook-loop interaction results in three autocleavage reactions and the release of two toxic effectors. Unexpectedly, the BH3-like domain containing ABD is not an active effector. Our findings allow us to understand key steps of Mcf1 intoxication at the molecular level.

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Disease

Primary Citation of related structures