8P2M image
Deposition Date 2023-05-16
Release Date 2023-09-06
Last Version Date 2023-09-06
Entry Detail
PDB ID:
8P2M
Keywords:
Title:
C. elegans TIR-1 protein.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.82 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NAD(+) hydrolase tir-1
Gene (Uniprot):tir-1
Chain IDs:A, B, C, D, E, F, G, H, I
Chain Length:738
Number of Molecules:9
Biological Source:Caenorhabditis elegans
Ligand Molecules
Primary Citation
Structure-function analysis of ceTIR-1/hSARM1 explains the lack of Wallerian axonal degeneration in C. elegans.
Cell Rep 42 113026 113026 (2023)
PMID: 37635352 DOI: 10.1016/j.celrep.2023.113026

Abstact

Wallerian axonal degeneration (WD) does not occur in the nematode C. elegans, in contrast to other model animals. However, WD depends on the NADase activity of SARM1, a protein that is also expressed in C. elegans (ceSARM/ceTIR-1). We hypothesized that differences in SARM between species might exist and account for the divergence in WD. We first show that expression of the human (h)SARM1, but not ceTIR-1, in C. elegans neurons is sufficient to confer axon degeneration after nerve injury. Next, we determined the cryoelectron microscopy structure of ceTIR-1 and found that, unlike hSARM1, which exists as an auto-inhibited ring octamer, ceTIR-1 forms a readily active 9-mer. Enzymatically, the NADase activity of ceTIR-1 is substantially weaker (10-fold higher Km) than that of hSARM1, and even when fully active, it falls short of consuming all cellular NAD+. Our experiments provide insight into the molecular mechanisms and evolution of SARM orthologs and WD across species.

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Protein

Chemical

Disease

Primary Citation of related structures