8OZZ image
Deposition Date 2023-05-09
Release Date 2024-05-08
Last Version Date 2024-05-08
Entry Detail
PDB ID:
8OZZ
Title:
PH domain of AKT-like kinase in Trypanosoma cruzi
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
10000
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PH domain of Akt-like kinase in Trypanosoma cruzi
Gene (Uniprot):Tc00.1047053509047.110
Chain IDs:A
Chain Length:114
Number of Molecules:1
Biological Source:Trypanosoma cruzi
Ligand Molecules
Primary Citation
Structural investigation of Trypanosoma cruzi Akt-like kinase as drug target against Chagas disease.
Sci Rep 14 10039 10039 (2024)
PMID: 38693166 DOI: 10.1038/s41598-024-59654-8

Abstact

According to the World Health Organization, Chagas disease (CD) is the most prevalent poverty-promoting neglected tropical disease. Alarmingly, climate change is accelerating the geographical spreading of CD causative parasite, Trypanosoma cruzi, which additionally increases infection rates. Still, CD treatment remains challenging due to a lack of safe and efficient drugs. In this work, we analyze the viability of T. cruzi Akt-like kinase (TcAkt) as drug target against CD including primary structural and functional information about a parasitic Akt protein. Nuclear Magnetic Resonance derived information in combination with Molecular Dynamics simulations offer detailed insights into structural properties of the pleckstrin homology (PH) domain of TcAkt and its binding to phosphatidylinositol phosphate ligands (PIP). Experimental data combined with Alpha Fold proposes a model for the mechanism of action of TcAkt involving a PIP-induced disruption of the intramolecular interface between the kinase and the PH domain resulting in an open conformation enabling TcAkt kinase activity. Further docking experiments reveal that TcAkt is recognized by human inhibitors PIT-1 and capivasertib, and TcAkt inhibition by UBMC-4 and UBMC-6 is achieved via binding to TcAkt kinase domain. Our in-depth structural analysis of TcAkt reveals potential sites for drug development against CD, located at activity essential regions.

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Primary Citation of related structures