8OYD image
Entry Detail
PDB ID:
8OYD
Keywords:
Title:
TrkB transmembrane domain NMR structure in DMPC/DHPC bicelles
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2023-05-04
Release Date:
2024-05-15
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the least restraint violations
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:BDNF/NT-3 growth factors receptor
Chain IDs:A, B
Chain Length:45
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for the transmembrane signaling and antidepressant-induced activation of the receptor tyrosine kinase TrkB.
Nat Commun 15 9316 9316 (2024)
PMID: 39472452 DOI: 10.1038/s41467-024-53710-7

Abstact

Neurotrophin receptors of the Trk family are involved in the regulation of brain development and neuroplasticity, and therefore can serve as targets for anti-cancer and stroke-recovery drugs, antidepressants, and many others. The structures of Trk protein domains in various states upon activation need to be elucidated to allow rational drug design. However, little is known about the conformations of the transmembrane and juxtamembrane domains of Trk receptors. In the present study, we employ NMR spectroscopy to solve the structure of the TrkB dimeric transmembrane domain in the lipid environment. We verify the structure using mutagenesis and confirm that the conformation corresponds to the active state of the receptor. Subsequent study of TrkB interaction with the antidepressant drug fluoxetine, and the antipsychotic drug chlorpromazine, provides a clear self-consistent model, describing the mechanism by which fluoxetine activates the receptor by binding to its transmembrane domain.

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Primary Citation of related structures