8OO0 image
Deposition Date 2023-04-04
Release Date 2024-02-21
Last Version Date 2024-02-21
Entry Detail
PDB ID:
8OO0
Keywords:
METAL BINDING PROTEIN
Title:
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Biological Source:
Source Organism(s):
Thermochaetoides thermophila DSM 1495 (Taxon ID: 759272)
Thermochaetoides thermophila (Taxon ID: 209285)
Expression System(s):
Thermochaetoides thermophila dsm 1495, Thermochaetoides thermophila, Spodoptera frugiperda
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8OO0 validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:28S rRNA
Chain IDs:A (auth: 1)
Chain Length:3337
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
Polymer Type:polyribonucleotide
Molecule:18S rRNA
Chain IDs:B (auth: 2)
Chain Length:1796
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
Polymer Type:polyribonucleotide
Molecule:5S rRNA
Chain IDs:C (auth: 3)
Chain Length:120
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
Polymer Type:polyribonucleotide
Molecule:5.8S rRNA
Chain IDs:D (auth: 4)
Chain Length:156
Number of Molecules:1
Biological Source:Thermochaetoides thermophila DSM 1495
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative guanine nucleotide-binding protein
Gene (Uniprot):CTHT_0047160
Chain IDs:E (auth: A)
Chain Length:316
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S9U0 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hyaluronan/mRNA-binding protein domain-containing protein
Gene (Uniprot):CTHT_0022330
Chain IDs:F (auth: B)
Chain Length:302
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S428 Pfam ID:PF09598, PF04774
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosome-associated molecular chaperone SSB1
Gene (Uniprot):SSB1
Chain IDs:G (auth: C)
Chain Length:614
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SCU5 Pfam ID:PF00012
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Methionine aminopeptidase 2
Gene (Uniprot):CTHT_0063100
Chain IDs:GC (auth: D)
Chain Length:371
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SEA9 Pfam ID:PF00557
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L2-like protein
Gene (Uniprot):CTHT_0023090
Chain IDs:H (auth: LA)
Chain Length:149
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S4P8 Pfam ID:PF00181, PF03947
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3-like protein
Gene (Uniprot):CTHT_0004490
Chain IDs:I (auth: LB)
Chain Length:388
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RXW1 Pfam ID:PF00297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4-like protein
Gene (Uniprot):CTHT_0061540
Chain IDs:J (auth: LC)
Chain Length:108
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SFC3 Pfam ID:PF00573, PF14374
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l5-like protein
Gene (Uniprot):HT_0063640
Chain IDs:K (auth: LD)
Chain Length:120
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SEG2 Pfam ID:PF17144, PF14204
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6
Gene (Uniprot):CTHT_0009640
Chain IDs:L (auth: LE)
Chain Length:200
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S0D6 Pfam ID:PF01159
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l7-like protein
Gene (Uniprot):CTHT_0071220
Chain IDs:M (auth: LF)
Chain Length:249
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SFL0 Pfam ID:PF08079, PF00327
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L8
Gene (Uniprot):CTHT_0042550
Chain IDs:N (auth: LG)
Chain Length:119
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SAJ9 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l9-like protein
Gene (Uniprot):CTHT_0009740
Chain IDs:O (auth: LH)
Chain Length:126
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S0E5 Pfam ID:PF00347
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10-like protein
Gene (Uniprot):CTHT_0063830
Chain IDs:P (auth: LI)
Chain Length:219
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SEI1 Pfam ID:PF00252
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative ribosomal protein
Gene (Uniprot):HT_0072970
Chain IDs:Q (auth: LJ)
Chain Length:173
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SHQ2 Pfam ID:PF00281, PF00673
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L12-like protein
Gene (Uniprot):CTHT_0066380
Chain IDs:R (auth: LK)
Chain Length:80
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SGH8 Pfam ID:PF03946, PF00298
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):CTHT_0045000
Chain IDs:S (auth: LL)
Chain Length:213
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S992 Pfam ID:PF01294
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14-like protein
Gene (Uniprot):CTHT_0014490
Chain IDs:T (auth: LM)
Chain Length:128
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1R0 Pfam ID:PF01929
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L15
Gene (Uniprot):CTHT_0002100
Chain IDs:U (auth: LN)
Chain Length:203
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RZ88 Pfam ID:PF00827
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L16-like protein
Gene (Uniprot):CTHT_0068840
Chain IDs:V (auth: LO)
Chain Length:204
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SH61 Pfam ID:PF00572
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l17-like protein
Gene (Uniprot):CTHT_0067970
Chain IDs:W (auth: LP)
Chain Length:92
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SGY1 Pfam ID:PF00237
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L18-like protein
Gene (Uniprot):CTHT_0045230
Chain IDs:X (auth: LQ)
Chain Length:147
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S9B5 Pfam ID:PF17135
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L19
Gene (Uniprot):CTHT_0047080
Chain IDs:Y (auth: LR)
Chain Length:25
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S9T3 Pfam ID:PF01280, PF25476
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L20
Gene (Uniprot):CTHT_0056900
Chain IDs:Z (auth: LS)
Chain Length:312
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SCE2 Pfam ID:PF01775
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l21-like protein
Gene (Uniprot):CTHT_0011760
Chain IDs:AA (auth: LT)
Chain Length:160
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S0Z3 Pfam ID:PF01157
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L22-like protein
Gene (Uniprot):CTHT_0052850
Chain IDs:BA (auth: LU)
Chain Length:127
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SDS8 Pfam ID:PF01776
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l23-like protein
Gene (Uniprot):CTHT_0074440
Chain IDs:CA (auth: LV)
Chain Length:139
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SI44 Pfam ID:PF00238
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24
Chain IDs:DA (auth: LW)
Chain Length:161
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1P9 Pfam ID:PF01246
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L25-like protein
Gene (Uniprot):CTHT_0023650
Chain IDs:EA (auth: LX)
Chain Length:156
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S507 Pfam ID:PF03939, PF00276
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26-like protein
Gene (Uniprot):CTHT_0007360
Chain IDs:FA (auth: LY)
Chain Length:138
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RYN9 Pfam ID:PF16906, PF00467
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):CTHT_0002720
Chain IDs:GA (auth: LZ)
Chain Length:135
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RZE9 Pfam ID:PF01777
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L18e/L15P domain-containing protein
Chain IDs:HA (auth: La)
Chain Length:149
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SGT6 Pfam ID:PF00828
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):CHGG_02990
Chain IDs:IA (auth: Lb)
Chain Length:388
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:Q2H9W4 Pfam ID:PF01779
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l30-like protein
Gene (Uniprot):CTHT_0063820
Chain IDs:JA (auth: Lc)
Chain Length:108
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SEI0 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative 60S ribosomal protein
Gene (Uniprot):CTHT_0059140
Chain IDs:KA (auth: Ld)
Chain Length:120
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SD68 Pfam ID:PF01198
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32-like protein
Gene (Uniprot):CTHT_0027000
Chain IDs:LA (auth: Le)
Chain Length:200
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S6V4 Pfam ID:PF01655
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein l33-like protein
Gene (Uniprot):CTHT_0057640
Chain IDs:MA (auth: Lf)
Chain Length:249
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SCL3 Pfam ID:PF01247
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein l34-like protein
Gene (Uniprot):CTHT_0071430
Chain IDs:NA (auth: Lg)
Chain Length:119
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SFN0 Pfam ID:PF01199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:dolichyl-diphosphooligosaccharide--protein glycotransferase
Gene (Uniprot):CTHT_0009650
Chain IDs:OA (auth: Lh)
Chain Length:126
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S0D7 Pfam ID:PF00831
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):CTHT_0054170
Chain IDs:PA (auth: Li)
Chain Length:219
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SBN1 Pfam ID:PF01158
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L37
Gene (Uniprot):CTHT_0011850
Chain IDs:QA (auth: Lj)
Chain Length:173
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S101 Pfam ID:PF01907
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Chain IDs:RA (auth: Lk)
Chain Length:80
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SG89 Pfam ID:PF01781
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):CHGG_03042
Chain IDs:SA (auth: Ll)
Chain Length:213
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:Q2H9R2 Pfam ID:PF00832
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-like domain-containing protein
Chain IDs:TA (auth: Lm)
Chain Length:128
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S8G4 Pfam ID:PF00240, PF01020
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41-A
Gene (Uniprot):RPL41A
Chain IDs:UA (auth: Ln), YA (auth: Lr)
Chain Length:203
Number of Molecules:2
Biological Source:Thermochaetoides thermophila
UniProt ID:P0CX86 Pfam ID:PF05162
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L44-like protein
Gene (Uniprot):CTHT_0055350
Chain IDs:VA (auth: Lo)
Chain Length:204
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SBZ6 Pfam ID:PF00935
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L43-like protein
Gene (Uniprot):CTHT_0026110
Chain IDs:WA (auth: Lp)
Chain Length:92
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S6B0 Pfam ID:PF01780
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative 60S ribosomal protein
Gene (Uniprot):CTHT_0070250
Chain IDs:XA (auth: Lq)
Chain Length:147
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SHJ6 Pfam ID:PF01778
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S acidic ribosomal protein P0
Gene (Uniprot):CTHT_0067070
Chain IDs:ZA (auth: Ls)
Chain Length:312
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SGP3 Pfam ID:PF00466, PF17777, PF00428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S0
Gene (Uniprot):RPS0
Chain IDs:AB (auth: SA)
Chain Length:285
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RYF9 Pfam ID:PF00318
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S1
Gene (Uniprot):RPS1
Chain IDs:BB (auth: SB)
Chain Length:82
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S7T8 Pfam ID:PF01015
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S2-like protein
Gene (Uniprot):CTHT_0047910
Chain IDs:CB (auth: SC)
Chain Length:68
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SAV4 Pfam ID:PF00333, PF03719
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3-like protein
Gene (Uniprot):CTHT_0026360
Chain IDs:DB (auth: SD)
Chain Length:56
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S6I7 Pfam ID:PF07650, PF00189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):CTHT_0012920
Chain IDs:EB (auth: SE)
Chain Length:61
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1A6 Pfam ID:PF08071, PF00900, PF00467, PF16121
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein s5-like protein
Gene (Uniprot):CTHT_0015350
Chain IDs:FB (auth: SF)
Chain Length:212
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1Z0 Pfam ID:PF00177
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):CTHT_0005340
Chain IDs:GB (auth: SG)
Chain Length:239
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RY43 Pfam ID:PF01092
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):CTHT_0021240
Chain IDs:HB (auth: SH)
Chain Length:203
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S8C4 Pfam ID:PF01251
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):CTHT_0005360
Chain IDs:IB (auth: SI)
Chain Length:202
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RY45 Pfam ID:PF01201
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein s9-like protein
Gene (Uniprot):CTHT_0011770
Chain IDs:JB (auth: SJ)
Chain Length:190
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S0Z4 Pfam ID:PF00163, PF01479
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein s10-like protein
Gene (Uniprot):CTHT_0002610
Chain IDs:KB (auth: SK)
Chain Length:159
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RZD8 Pfam ID:PF03501
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11-like protein
Gene (Uniprot):CTHT_0060290
Chain IDs:LB (auth: SL)
Chain Length:161
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SF00 Pfam ID:PF16205, PF00366
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S12
Gene (Uniprot):CTHT_0070080
Chain IDs:MB (auth: SM)
Chain Length:144
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SHH9 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S13-like protein
Gene (Uniprot):CTHT_0003530
Chain IDs:NB (auth: SN)
Chain Length:151
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RZM9 Pfam ID:PF08069, PF00312
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S14-like protein
Gene (Uniprot):CTHT_0071230
Chain IDs:OB (auth: SO)
Chain Length:150
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SFL1 Pfam ID:PF00411
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein s15-like protein
Gene (Uniprot):CTHT_0009120
Chain IDs:PB (auth: SP)
Chain Length:153
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S084 Pfam ID:PF00203
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16-like protein
Gene (Uniprot):CTHT_0054540
Chain IDs:QB (auth: SQ)
Chain Length:143
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SBR7 Pfam ID:PF00380
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17-like protein
Gene (Uniprot):CTHT_0037790
Chain IDs:RB (auth: SR)
Chain Length:143
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S871 Pfam ID:PF00833
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative ribosomal protein
Gene (Uniprot):CTHT_0026460
Chain IDs:SB (auth: SS)
Chain Length:156
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S6J7 Pfam ID:PF00416
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19-like protein
Gene (Uniprot):CTHT_0071200
Chain IDs:TB (auth: ST)
Chain Length:153
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SFK8 Pfam ID:PF01090
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20-like protein
Gene (Uniprot):CTHT_0020000
Chain IDs:UB (auth: SU)
Chain Length:116
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S379 Pfam ID:PF00338
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21-like protein
Gene (Uniprot):CTHT_0074200
Chain IDs:VB (auth: SV)
Chain Length:98
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SI21 Pfam ID:PF01249
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S22-like protein
Gene (Uniprot):CTHT_0070090
Chain IDs:WB (auth: SW)
Chain Length:130
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0SHI0 Pfam ID:PF00410
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein s23-like protein
Gene (Uniprot):CTHT_0005070
Chain IDs:XB (auth: SX)
Chain Length:145
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0RY17 Pfam ID:PF00164
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):CTHT_0041970.2
Chain IDs:YB (auth: SY)
Chain Length:136
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:P0CU28 Pfam ID:PF01282
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):CTHT_0015340
Chain IDs:ZB (auth: SZ)
Chain Length:99
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1Y9 Pfam ID:PF03297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):CTHT_0018830
Chain IDs:AC (auth: Sa)
Chain Length:285
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S2X4 Pfam ID:PF01283
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein s27-like protein
Gene (Uniprot):CTHT_0014630
Chain IDs:BC (auth: Sb)
Chain Length:82
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S1S4 Pfam ID:PF01667
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28-like protein
Gene (Uniprot):CTHT_0046470
Chain IDs:CC (auth: Sc)
Chain Length:68
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S9M9 Pfam ID:PF01200
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29
Gene (Uniprot):CHGG_02536
Chain IDs:DC (auth: Sd)
Chain Length:56
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:Q2HB68 Pfam ID:PF00253
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S30
Gene (Uniprot):CHGG_06490
Chain IDs:EC (auth: Se)
Chain Length:61
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:Q2H4C5 Pfam ID:PF04758
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27a-like protein
Gene (Uniprot):CTHT_0018840
Chain IDs:FC (auth: Sf)
Chain Length:212
Number of Molecules:1
Biological Source:Thermochaetoides thermophila
UniProt ID:G0S2X5 Pfam ID:PF01599, PF00240
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SAC V SER modified residue
Ligand Molecules
ZN
Primary Citation
Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun 15 716 716 (2024)
PMID: 38267453 DOI: 10.1038/s41467-024-44862-7

Abstact

Excision of the initiator methionine is among the first co-translational processes that occur at the ribosome. While this crucial step in protein maturation is executed by two types of methionine aminopeptidases in eukaryotes (MAP1 and MAP2), additional roles in disease and translational regulation have drawn more attention to MAP2. Here, we report several cryo-EM structures of human and fungal MAP2 at the 80S ribosome. Irrespective of nascent chains, MAP2 can occupy the tunnel exit. On nascent chain displaying ribosomes, the MAP2-80S interaction is highly dynamic and the MAP2-specific N-terminal extension engages in stabilizing interactions with the long rRNA expansion segment ES27L. Loss of this extension by autoproteolytic cleavage impedes interactions at the tunnel, while promoting MAP2 to enter the ribosomal A-site, where it engages with crucial functional centers of translation. These findings reveal that proteolytic remodeling of MAP2 severely affects ribosome binding, and set the stage for targeted functional studies.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
8OO0
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