8OLC image
Entry Detail
PDB ID:
8OLC
EMDB ID:
EMD-16955
Keywords:
VIRUS
Title:
SA11 Rotavirus Trypsinized Triple Layered Particle
Biological Source:
Source Organism:
Rotavirus
Host Organism:
Chlorocebus aethiops
PDB Version:
Deposition Date:
2023-03-30
Release Date:
2024-09-25
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.48 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8OLC validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Inner capsid protein VP2
Chain IDs:AA (auth: A), BA (auth: B)
Chain Length:882
Number of Molecules:2
Biological Source:Rotavirus
UniProt ID:A2T3R1 Pfam ID:PF05087
Protein Blast
Polymer Type:polypeptide(L)
Description:Intermediate capsid protein VP6
Chain IDs:N (auth: C), O (auth: D), P (auth: E), Q (auth: F), R (auth: G), S (auth: H), T (auth: I), U (auth: J), V (auth: K), W (auth: L), X (auth: M), Y (auth: N), Z (auth: O)
Chain Length:397
Number of Molecules:13
Biological Source:Rotavirus
UniProt ID:A2T3S6 Pfam ID:PF00980
Protein Blast
Polymer Type:polypeptide(L)
Description:Outer capsid glycoprotein VP7
Chain IDs:A (auth: c), B (auth: d), C (auth: e), D (auth: f), E (auth: g), F (auth: h), G (auth: i), H (auth: j), I (auth: k), J (auth: l), K (auth: m), L (auth: n), M (auth: o)
Chain Length:397
Number of Molecules:13
Biological Source:Rotavirus
UniProt ID:A0A060IEQ1 Pfam ID:PF00434
Ligand Molecules
CA
NAG
ZN
Primary Citation
Structural basis of rotavirus spike proteolytic activation
To Be Published ? ? ? (?)
Primary Citation of related structures
8OLC