8OIV image
Entry Detail
PDB ID:
8OIV
Keywords:
Title:
Monkeypox virus VP39 in complex with SAH and cap0
Biological Source:
PDB Version:
Deposition Date:
2023-03-23
Release Date:
2023-08-23
Method Details:
Experimental Method:
Resolution:
2.12 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
Chain IDs:A, B
Chain Length:307
Number of Molecules:2
Biological Source:Monkeypox virus
Polymer Type:polyribonucleotide
Description:mGpppGAAAAA
Chain IDs:C (auth: D)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
Structural basis for RNA-cap recognition and methylation by the mpox methyltransferase VP39.
Antiviral Res. 216 105663 105663 (2023)
PMID: 37421984 DOI: 10.1016/j.antiviral.2023.105663

Abstact

Mpox is a zoonotic disease caused by the mpox virus (MPXV), which has gained attention due to its rapid and widespread transmission, with reports from more than 100 countries. The virus belongs to the Orthopoxvirus genus, which also includes variola virus and vaccinia virus. In poxviruses, the RNA cap is crucial for the translation and stability of viral mRNAs and also for immune evasion. This study presents the crystal structure of the mpox 2'-O-methyltransfarase VP39 in complex with a short cap-0 RNA. The RNA substrate binds to the protein without causing any significant changes to its overall fold and is held in place by a combination of electrostatic interactions, π-π stacking and hydrogen bonding. The structure also explains the mpox VP39 preference for a guanine base at the first position; it reveals that guanine forms a hydrogen bond that an adenine would not be able to form.

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Primary Citation of related structures