8OE4 image
Deposition Date 2023-03-10
Release Date 2024-02-07
Last Version Date 2024-11-20
Entry Detail
PDB ID:
8OE4
Title:
Cryo-EM structure of a pre-dimerized human IL-23 complete extracellular signaling complex.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interleukin-12 subunit beta
Gene (Uniprot):IL12B
Chain IDs:A
Chain Length:306
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interleukin-23 subunit alpha
Gene (Uniprot):IL23A
Chain IDs:B
Chain Length:186
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interleukin-23 receptor,Calmodulin-1
Gene (Uniprot):CALM1, IL23R
Chain IDs:C
Chain Length:485
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interleukin-12 receptor subunit beta-1,Death-associated protein kinase 1
Gene (Uniprot):IL12RB1, DAPK1
Chain IDs:D
Chain Length:547
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structures of complete extracellular receptor assemblies mediated by IL-12 and IL-23.
Nat.Struct.Mol.Biol. 31 591 597 (2024)
PMID: 38287195 DOI: 10.1038/s41594-023-01190-6

Abstact

Cell-surface receptor complexes mediated by pro-inflammatory interleukin (IL)-12 and IL-23, both validated therapeutic targets, are incompletely understood due to the lack of structural insights into their complete extracellular assemblies. Furthermore, there is a paucity of structural details describing the IL-12-receptor interaction interfaces, in contrast to IL-23-receptor complexes. Here we report structures of fully assembled mouse IL-12/human IL-23-receptor complexes comprising the complete extracellular segments of the cognate receptors determined by electron cryo-microscopy. The structures reveal key commonalities but also surprisingly diverse features. Most notably, whereas IL-12 and IL-23 both utilize a conspicuously presented aromatic residue on their α-subunit as a hotspot to interact with the N-terminal Ig domain of their high-affinity receptors, only IL-12 juxtaposes receptor domains proximal to the cell membrane. Collectively, our findings will help to complete our understanding of cytokine-mediated assemblies of tall cytokine receptors and will enable a cytokine-specific interrogation of IL-12/IL-23 signaling in physiology and disease.

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Primary Citation of related structures
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