ISDA: 8KIE

Deposition Date 2023-08-23

Release Date 2024-08-28

Last Version Date 2025-06-25

Entry Detail

PDB ID:

8KIE

Keywords:

RIBOSOME

Title:

Structure of YchF with 50S ribosomal subunit (local map)

Biological Source:

Source Organism(s):

Escherichia coli (Taxon ID: 562)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Polymer Type:polyribonucleotide
Molecule:23S rRNA (partial)
Chain IDs:B (auth: a)
Chain Length:2904
Number of Molecules:1
Biological Source:Escherichia coli

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L14
Gene (Uniprot):rplN
Chain IDs:C (auth: j)
Chain Length:123
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0ADY3 Pfam ID:PF00238

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L19
Gene (Uniprot):rplS
Chain IDs:D (auth: o)
Chain Length:115
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0A7K6 Pfam ID:PF01245

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribosome-binding ATPase YchF
Gene (Uniprot):ychF
Mutagens:H114A
Chain IDs:A (auth: y)
Chain Length:379
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0ABU2 Pfam ID:PF01926, PF06071

Ligand Molecules

Primary Citation

Structure basis of translation regulation by YchF bound to ribosome

Li, X, Yu, T, Li, Q, Zeng, F.Show

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Primary Citation of related structures

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