8KIE image
Deposition Date 2023-08-23
Release Date 2024-08-28
Last Version Date 2025-06-25
Entry Detail
PDB ID:
8KIE
Keywords:
RIBOSOME
Title:
Structure of YchF with 50S ribosomal subunit (local map)
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8KIE validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:23S rRNA (partial)
Chain IDs:B (auth: a)
Chain Length:2904
Number of Molecules:1
Biological Source:Escherichia coli
Protein Blast
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L14
Gene (Uniprot):rplN
Chain IDs:C (auth: j)
Chain Length:123
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0ADY3 Pfam ID:PF00238
Protein Blast
Polymer Type:polypeptide(L)
Molecule:50S ribosomal protein L19
Gene (Uniprot):rplS
Chain IDs:D (auth: o)
Chain Length:115
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0A7K6 Pfam ID:PF01245
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosome-binding ATPase YchF
Gene (Uniprot):ychF
Mutations:H114A
Chain IDs:A (auth: y)
Chain Length:379
Number of Molecules:1
Biological Source:Escherichia coli
UniProt ID:P0ABU2 Pfam ID:PF01926, PF06071
Ligand Molecules
MG
Primary Citation
Structure basis of translation regulation by YchF bound to ribosome
To Be Published ? ? ? (?)
Primary Citation of related structures
8KIE