8KHR image
Deposition Date 2023-08-22
Release Date 2024-06-19
Last Version Date 2024-10-23
Entry Detail
PDB ID:
8KHR
Title:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.25 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein H
Chain IDs:D (auth: A)
Chain Length:655
Number of Molecules:1
Biological Source:Epstein-Barr virus (strain GD1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Envelope glycoprotein L
Chain IDs:E (auth: B)
Chain Length:107
Number of Molecules:1
Biological Source:Epstein-Barr virus (strain GD1)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Soluble gp42
Gene (Uniprot):BZLF2
Chain IDs:A (auth: C)
Chain Length:196
Number of Molecules:1
Biological Source:Epstein-Barr virus (strain GD1)
Polymer Type:polypeptide(L)
Molecule:2C1 heavy chain
Chain IDs:B (auth: H)
Chain Length:111
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:2C1 light chain
Chain IDs:C (auth: L)
Chain Length:107
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Potent human monoclonal antibodies targeting Epstein-Barr virus gp42 reveal vulnerable sites for virus infection.
Cell Rep Med 5 101573 101573 (2024)
PMID: 38776874 DOI: 10.1016/j.xcrm.2024.101573

Abstact

Epstein-Barr virus (EBV) is linked to various malignancies and autoimmune diseases, posing a significant global health challenge due to the lack of specific treatments or vaccines. Despite its crucial role in EBV infection in B cells, the mechanisms of the glycoprotein gp42 remain elusive. In this study, we construct an antibody phage library from 100 EBV-positive individuals, leading to the identification of two human monoclonal antibodies, 2B7 and 2C1. These antibodies effectively neutralize EBV infection in vitro and in vivo while preserving gp42's interaction with the human leukocyte antigen class II (HLA-II) receptor. Structural analysis unveils their distinct binding epitopes on gp42, different from the HLA-II binding site. Furthermore, both 2B7 and 2C1 demonstrate potent neutralization of EBV infection in HLA-II-positive epithelial cells, expanding our understanding of gp42's role. Overall, this study introduces two human anti-gp42 antibodies with potential implications for developing EBV vaccines targeting gp42 epitopes, addressing a critical gap in EBV research.

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Primary Citation of related structures
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