8KES image
Deposition Date 2023-08-13
Release Date 2025-02-19
Last Version Date 2025-06-04
Entry Detail
PDB ID:
8KES
Keywords:
ALLERGEN
Title:
Cryo-EM structure of HRD1-SEL1LX3-XTP3B complex in C1 symmetry
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8KES validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase synoviolin
Gene (Uniprot):SYVN1
Chain IDs:A, E (auth: B)
Chain Length:617
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q86TM6 Pfam ID:PF13639
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein sel-1 homolog 1
Gene (Uniprot):SEL1L
Chain IDs:B (auth: D), F (auth: C)
Chain Length:794
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q9UBV2 Pfam ID:PF00040, PF08238
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Endoplasmic reticulum lectin 1
Gene (Uniprot):ERLEC1
Chain IDs:C (auth: E), G (auth: F)
Chain Length:483
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q96DZ1 Pfam ID:PF07915
Polymer Type:polypeptide(L)
Molecule:Ala-Asn-Ala
Chain IDs:D (auth: G), H
Chain Length:3
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Cryo-EM structure of human complex B
To Be Published ? ? ? (?)
Primary Citation of related structures
8KES