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Entry Detail
PDB ID:
8KE8
Title:
Crystal structure of TetR-type transcriptional factor NalC from P. aeruginosa
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2023-08-11
Release Date:
2023-09-20
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NalC
Chain IDs:A, B
Chain Length:213
Number of Molecules:2
Biological Source:Pseudomonas aeruginosa PAO1
Primary Citation
Structural insights into the transcriptional regulator NalC, a key component of the MexAB-OprM efflux pump system, from Pseudomonas aeruginosa.
Biochem.Biophys.Res.Commun. 679 47 51 (2023)
PMID: 37666047 DOI: 10.1016/j.bbrc.2023.08.065

Abstact

Pseudomonas aeruginosa is an opportunistic pathogen with significant public health implications due to its multi-drug resistance (MDR). Among the mechanisms that mediate MDR, the NalC protein, a member of the TetR family of transcriptional regulators, modulates the mexAB-oprM operon, thus facilitating the efflux pump system. The resistance-nodulation-division (RND) family of multidrug efflux pumps plays a crucial role in expelling a broad spectrum of antimicrobial compounds, serving as a key adaptive mechanism. Structural analyses revealed that NalC adopts a modular architecture consisting of distinct domains involved in ligand recognition and transcriptional regulation. The N-terminal domain of NalC contains a DNA-binding helix-turn-helix motif, which interacts with specific DNA sequences in the PA3720-armR operon region. This interaction initiates the transcriptional activation of the efflux pump system. On the other hand, the C-terminal domain of NalC exhibits a highly dynamic structure and is implicated in ligand sensing and signal transduction. Our findings suggest potential binding sites for small molecules that could act as allosteric modulators, thereby providing new avenues for the development of therapeutic strategies targeting MDR Pseudomonas aeruginosa.

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