ISDA

Entry Detail

PDB ID:

8KDA

EMDB ID:

EMD-37129

Keywords:

HYDROLASE/RNA

Title:

Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs

Biological Source:

Source Organism:

Hydrogenobacter thermophilus DSM 653, Aquifex aeolicus

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2023-08-09

Release Date:

2024-08-14

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.19 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:RNA-free ribonuclease P
Chain IDs:A (auth: E), G (auth: F), H (auth: G), I (auth: H), J (auth: C), K (auth: D), L (auth: I), M (auth: J), N (auth: A), O (auth: B), P (auth: K), Q (auth: L)
Chain Length:189
Number of Molecules:12
Biological Source:Hydrogenobacter thermophilus DSM 653

UniProt ID:D3DIV8 Pfam ID:PF08745

Polymer Type:polyribonucleotide
Description:Aquifex aeolicus pre-tRNAVal
Chain IDs:B (auth: T), C (auth: M), D (auth: N), E (auth: O), F (auth: P)
Chain Length:73
Number of Molecules:5
Biological Source:Aquifex aeolicus

Ligand Molecules

Primary Citation

Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs

Teramoto, T, Koyasu, T, Yokogawa, T, Adachi, N, Mayanagi, K, Nakamura, T, Senda, T, Kakuta, Y.Show

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Primary Citation of related structures