8K9J image
Deposition Date 2023-08-01
Release Date 2024-07-31
Last Version Date 2025-07-02
Entry Detail
PDB ID:
8K9J
Keywords:
VIRAL PROTEIN
Title:
SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Mus musculus (Taxon ID: 10090)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
6.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8K9J validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Heavy chain of S2H5 Fab
Chain IDs:B (auth: A), F (auth: G)
Chain Length:216
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Light chain of S2H5 Fab
Chain IDs:C (auth: B), G (auth: F)
Chain Length:219
Number of Molecules:2
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A (auth: E), D (auth: C), E (auth: D)
Chain Length:1261
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601
Ligand Molecules
NAG
Primary Citation
Molecular basis of SARS-CoV-2 immune evasion of NTD neutralizing antibodies.
Dian Zi Xian Wei Xue Bao ? ? ? (2024)
DOI: 10.3969/j.issn.1000-6281.2024.03.009
Primary Citation of related structures
8K9J