8K66 image
Deposition Date 2023-07-25
Release Date 2024-04-03
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8K66
Title:
Cryo-EM structure of Oryza sativa HKT2;1 at 2.5 angstrom
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.53 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cation transporter HKT2;1
Gene (Uniprot):HKT2;1
Chain IDs:A, B
Chain Length:543
Number of Molecules:2
Biological Source:Oryza sativa subsp. japonica
Primary Citation
Structural insights into ion selectivity and transport mechanisms of Oryza sativa HKT2;1 and HKT2;2/1 transporters.
Nat.Plants 10 633 644 (2024)
PMID: 38570642 DOI: 10.1038/s41477-024-01665-4

Abstact

Plant high-affinity K+ transporters (HKTs) play a pivotal role in maintaining the balance of Na+ and K+ ions in plants, thereby influencing plant growth under K+-depleted conditions and enhancing tolerance to salinity stress. Here we report the cryo-electron microscopy structures of Oryza sativa HKT2;1 and HKT2;2/1 at overall resolutions of 2.5 Å and 2.3 Å, respectively. Both transporters adopt a dimeric assembly, with each protomer enclosing an ion permeation pathway. Comparison between the selectivity filters of the two transporters reveals the critical roles of Ser88/Gly88 and Val243/Gly243 in determining ion selectivity. A constriction site along the ion permeation pathway is identified, consisting of Glu114, Asn273, Pro392, Pro393, Arg525, Lys517 and the carboxy-terminal Trp530 from the neighbouring protomer. The linker between domains II and III adopts a stable loop structure oriented towards the constriction site, potentially participating in the gating process. Electrophysiological recordings, yeast complementation assays and molecular dynamics simulations corroborate the functional importance of these structural features. Our findings provide crucial insights into the ion selectivity and transport mechanisms of plant HKTs, offering valuable structural templates for developing new salinity-tolerant cultivars and strategies to increase crop yields.

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