8JYV image
Deposition Date 2023-07-04
Release Date 2024-05-01
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8JYV
Keywords:
Title:
Crystal structure of the gasdermin from Trichoplax adhaerens
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 31 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Gasdermin pore forming domain-containing protein
Gene (Uniprot):TRIADDRAFT_52857
Chain IDs:A
Chain Length:243
Number of Molecules:1
Biological Source:Trichoplax adhaerens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science 384 adm9190 adm9190 (2024)
PMID: 38662913 DOI: 10.1126/science.adm9190

Abstact

Gasdermins (GSDMs) are pore-forming proteins that execute pyroptosis for immune defense. GSDMs are two-domain proteins activated by proteolytic removal of the inhibitory domain. In this work, we report two types of cleavage-independent GSDM activation. First, TrichoGSDM, a pore-forming domain-only protein from the basal metazoan Trichoplax adhaerens, is a disulfides-linked autoinhibited dimer activated by reduction of the disulfides. The cryo-electron microscopy (cryo-EM) structure illustrates the assembly mechanism for the 44-mer TrichoGSDM pore. Second, RCD-1-1 and RCD-1-2, encoded by the polymorphic regulator of cell death-1 (rcd-1) gene in filamentous fungus Neurospora crassa, are also pore-forming domain-only GSDMs. RCD-1-1 and RCD-1-2, when encountering each other, form pores and cause pyroptosis, underlying allorecognition in Neurospora. The cryo-EM structure reveals a pore of 11 RCD-1-1/RCD-1-2 heterodimers and a heterodimerization-triggered pore assembly mechanism. This study shows mechanistic diversities in GSDM activation and indicates versatile functions of GSDMs.

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Primary Citation of related structures
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