8JYR image
Deposition Date 2023-07-03
Release Date 2024-03-13
Last Version Date 2024-10-16
Entry Detail
PDB ID:
8JYR
Keywords:
Title:
Crystal structure of anti-HER2 antibody H2Mab-119 in complex with HER2 domain I
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.69 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Receptor tyrosine-protein kinase erbB-2
Gene (Uniprot):ERBB2
Chain IDs:A
Chain Length:202
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:H2Mab-119 VH-CH1
Chain IDs:B (auth: H)
Chain Length:222
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:H2Mab-119 light chain
Chain IDs:C (auth: L)
Chain Length:218
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Locally misfolded HER2 expressed on cancer cells is a promising target for development of cancer-specific antibodies.
Structure 32 536 549.e5 (2024)
PMID: 38460519 DOI: 10.1016/j.str.2024.02.007

Abstact

Overexpression of human epidermal growth factor receptor 2 (HER2) in breast and gastric cancers is associated with a poor prognosis, making it an important therapeutic target. Here, we establish a novel cancer-specific anti-HER2 antibody, H2Mab-214. H2Mab-214 reacts with HER2 on cancer cells, but unlike the therapeutic antibody trastuzumab, it does not react with HER2 on normal cells in flow cytometry measurements. A crystal structure suggests that H2Mab-214 recognizes a structurally disrupted region in the HER2 domain IV, which normally forms a β-sheet. We show that this misfolding is inducible by site-directed mutagenesis mimicking the disulfide bond defects that also may occur in cancer cells, indicating that the local misfolding in the Cys-rich domain IV governs the cancer-specificity of H2Mab-214. Furthermore, we show that H2Mab-214 effectively suppresses tumor growth in xenograft mouse models. Our findings offer a potential strategy for developing cancer-specific therapeutic antibodies that target partially misfolded cell surface receptors.

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Primary Citation of related structures