8JUI image
Deposition Date 2023-06-26
Release Date 2024-07-03
Last Version Date 2024-12-18
Entry Detail
PDB ID:
8JUI
Keywords:
Title:
Crystal structures of Cystathionine beta lyase from Bacillus cereus ATCC 14579
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 62 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cystathionine beta-lyase
Gene (Uniprot):BC_4254
Chain IDs:A
Chain Length:395
Number of Molecules:1
Biological Source:Bacillus cereus ATCC 14579
Ligand Molecules
Primary Citation
Crystal structures of cystathionine beta-lyase and cystathionine beta-lyase like protein from Bacillus cereus ATCC 14579.
Biochem.Biophys.Res.Commun. 742 151122 151122 (2024)
PMID: 39644606 DOI: 10.1016/j.bbrc.2024.151122

Abstact

Cystathionine β-lyase (CBL) and cystathionine β-lyase-like protein (CBLP) are key PLP-dependent enzymes involved in methionine biosynthesis. In Bacillus cereus ATCC 14579 CBL (BcCBL) and CBLP (BcCBLP) catalyze the conversion of cystathionine to homocysteine and pyruvate. In this study, we found that both BcCBL and BcCBLP effectively catalyze cystathionine cleavage, with BcCBLP exhibiting a higher catalytic efficiency (kcat) and low substrate affinity (Km). We determined their crystal structures in complex with pyridoxal phosphate (PLP). BcCBL, forming a tetramer, aligns with typical CBLs in sulfur amino acid metabolism, while BcCBLP, forming a dimer, resembles the bifunctional MalY enzyme from Escherichia coli, indicating potential additional regulatory roles. These structural and functional insights highlight the distinct roles of BcCBL and BcCBLP in cellular metabolism. This study provides valuable insights into the structural diversity and potential functions of these enzymes, contributing to the broader knowledge of PLP-dependent enzymatic mechanisms.

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Primary Citation of related structures