ISDA

Entry Detail

PDB ID:

8JSI

EMDB ID:

EMD-36621

Keywords:

DNA BINDING PROTEIN/DNA

Title:

Cryo-EM structure of a DNA-protein complex

Biological Source:

Source Organism:

Thermococcus thioreducens

Host Organism:

Escherichia coli BL21(DE3)

PDB Version:

Deposition Date:

2023-06-20

Release Date:

2024-06-26

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.90 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Argonaute family protein
Chain IDs:A, D (auth: B)
Chain Length:750
Number of Molecules:2
Biological Source:Thermococcus thioreducens

UniProt ID:A0A0Q2M2Z1 Pfam ID:PF22476, PF12212, PF02171

Polymer Type:polydeoxyribonucleotide
Description:DNA (5'-D(P*GP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*T)-3')
Chain IDs:C (auth: G), F (auth: H)
Chain Length:16
Number of Molecules:2
Biological Source:Thermococcus thioreducens

Polymer Type:polydeoxyribonucleotide
Description:DNA (5'-D(P*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*C)-3')
Chain IDs:B (auth: T), E (auth: U)
Chain Length:16
Number of Molecules:2
Biological Source:Thermococcus thioreducens

Ligand Molecules

Primary Citation

Cryo-EM structure of a DNA-protein complex

Li, Z.Show

To Be Published ? ? ? (?)

Primary Citation of related structures