8JRV image
Deposition Date 2023-06-17
Release Date 2023-08-16
Last Version Date 2025-07-16
Entry Detail
PDB ID:
8JRV
Title:
Cryo-EM structure of the glucagon receptor bound to glucagon and beta-arrestin 1
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-arrestin 1 and single-chain fragment variable 30 (scFv30)
Chain IDs:C (auth: A), D (auth: H), E (auth: L)
Chain Length:627
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Nanobody 32
Chain IDs:F (auth: B)
Chain Length:126
Number of Molecules:1
Biological Source:Escherichia phage EcSzw-2
Polymer Type:polypeptide(L)
Molecule:Glucagon
Gene (Uniprot):GCG
Chain IDs:B (auth: G)
Chain Length:29
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:HA signal peptide,HPC4 purification tag,Glucagon receptor,C-terminal tail of Vasopressin V2 receptor
Gene (Uniprot):HA, PROC, AVPR2, GCGR
Chain IDs:A (auth: R)
Chain Length:476
Number of Molecules:1
Biological Source:Influenza A virus (strain A/Victoria/3/1975 H3N2), Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP A SER modified residue
TPO A THR modified residue
Ligand Molecules
Primary Citation
Tail engagement of arrestin at the glucagon receptor.
Nature 620 904 910 (2023)
PMID: 37558880 DOI: 10.1038/s41586-023-06420-x

Abstact

Arrestins have pivotal roles in regulating G protein-coupled receptor (GPCR) signalling by desensitizing G protein activation and mediating receptor internalization1,2. It has been proposed that the arrestin binds to the receptor in two different conformations, 'tail' and 'core', which were suggested to govern distinct processes of receptor signalling and trafficking3,4. However, little structural information is available for the tail engagement of the arrestins. Here we report two structures of the glucagon receptor (GCGR) bound to β-arrestin 1 (βarr1) in glucagon-bound and ligand-free states. These structures reveal a receptor tail-engaged binding mode of βarr1 with many unique features, to our knowledge, not previously observed. Helix VIII, instead of the receptor core, has a major role in accommodating βarr1 by forming extensive interactions with the central crest of βarr1. The tail-binding pose is further defined by a close proximity between the βarr1 C-edge and the receptor helical bundle, and stabilized by a phosphoinositide derivative that bridges βarr1 with helices I and VIII of GCGR. Lacking any contact with the arrestin, the receptor core is in an inactive state and loosely binds to glucagon. Further functional studies suggest that the tail conformation of GCGR-βarr governs βarr recruitment at the plasma membrane and endocytosis of GCGR, and provides a molecular basis for the receptor forming a super-complex simultaneously with G protein and βarr to promote sustained signalling within endosomes. These findings extend our knowledge about the arrestin-mediated modulation of GPCR functionalities.

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Primary Citation of related structures