ISDA

Deposition Date 2023-06-16

Release Date 2024-09-11

Last Version Date 2025-07-23

Entry Detail

PDB ID:

8JR8

Keywords:

DNA BINDING PROTEIN/DNA/RNA

Title:

MapSPARTA dimer bound with guide-target

Biological Source:

Source Organism:

Maribacter polysiphoniae (Taxon ID: 429344)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.48 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Piwi domain-containing protein
Gene (Uniprot):LX92_01809
Chain IDs:E (auth: A), F (auth: C)
Chain Length:507
Number of Molecules:2
Biological Source:Maribacter polysiphoniae

UniProt ID:A0A316E3U6

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:TIR domain-containing protein
Gene (Uniprot):LX92_01810
Chain IDs:G (auth: D), H (auth: B)
Chain Length:452
Number of Molecules:2
Biological Source:Maribacter polysiphoniae

UniProt ID:A0A316E683 Pfam ID:PF13676

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')
Chain IDs:A (auth: E), C (auth: G)
Chain Length:21
Number of Molecules:2
Biological Source:Maribacter polysiphoniae

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:B (auth: F), D (auth: H)
Chain Length:25
Number of Molecules:2
Biological Source:Maribacter polysiphoniae

Ligand Molecules

Primary Citation

Cryo-EM Structure of MapSPARTA

Huang, P.P, Guo, L.J, Li, Z.X, Yan, P.R, Chen, M.R, Xiao, Y.B.Show

To Be Published ? ? ? (?)

Primary Citation of related structures