8JPN image
Deposition Date 2023-06-12
Release Date 2024-05-22
Last Version Date 2024-10-30
Entry Detail
PDB ID:
8JPN
Keywords:
MEMBRANE PROTEIN
Title:
Cryo-EM structure of succinate receptor bound to cis-epoxysuccinic acid coupling to Gi
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Escherichia coli (Taxon ID: 562)
Oplophorus gracilirostris (Taxon ID: 727944)
Host Organism:
Spodoptera frugiperda
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8JPN validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(i) subunit alpha-1
Gene (Uniprot):GNAI1
Chain IDs:A
Chain Length:354
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63096 Pfam ID:PF00503
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):GNB1
Chain IDs:B
Chain Length:377
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62873 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Gene (Uniprot):GNG2
Chain IDs:C
Chain Length:71
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P59768 Pfam ID:PF00631
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Soluble cytochrome b562,Succinate receptor 1,Oplophorus-luciferin 2-monooxygenase catalytic subunit
Gene (Uniprot):cybC, SUCNR1
Chain IDs:D (auth: R)
Chain Length:658
Number of Molecules:1
Biological Source:Escherichia coli, Homo sapiens, Oplophorus gracilirostris
UniProt ID:P0ABE7,Q9BXA5,Q9GV45 Pfam ID:PF00001, PF07361 EC:1.13.12.13
Polymer Type:polypeptide(L)
Molecule:scFv16
Chain IDs:E (auth: S)
Chain Length:286
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
U9S
Primary Citation
Molecular activation and G protein coupling selectivity of human succinate receptor SUCR1.
Cell Res. 34 590 593 (2024)
PMID: 38744983 DOI: 10.1038/s41422-024-00968-7
Primary Citation of related structures
8JPN