ISDA

Entry Detail

PDB ID:

8JN2

EMDB ID:

EMD-36430

Keywords:

VIRUS/IMMUNE SYSTEM

Title:

Cryo-EM structure of dengue virus serotype 3 strain 863DK in complex with human antibody DENV-115 Fab at 4 deg C (subparticle LLR-LRR)

Biological Source:

Source Organism:

Dengue virus type 3, Homo sapiens

Host Organism:

Aedes albopictus

PDB Version:

Deposition Date:

2023-06-06

Release Date:

2024-06-12

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Envelope protein
Chain IDs:A, C, E
Chain Length:493
Number of Molecules:3
Biological Source:Dengue virus type 3

UniProt ID:A9LIF4 Pfam ID:PF00869, PF02832, PF21659

Protein Blast

Polymer Type:polypeptide(L)
Description:Membrane protein
Chain IDs:B, D, F
Chain Length:75
Number of Molecules:3
Biological Source:Dengue virus type 3

UniProt ID:M1J7M3 Pfam ID:PF01004

Polymer Type:polypeptide(L)
Description:Human antibody DENV-115 heavy chain
Chain IDs:G (auth: H)
Chain Length:122
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Description:Human antibody DENV-115 light chain
Chain IDs:H (auth: L)
Chain Length:110
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants

Fibriansah, G, Ng, T.S, Lim, X.N, Shebanova, A, Ng, L.C, Tan, S.L, Tan, A.W.K, Shi, J, Crowe, J.E, Lok, S.M.Show

To Be Published ? ? ? (?)

Primary Citation of related structures